RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PGM2Q96G03 612 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 HPDLQ96IR7 371 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 PCDHB18PQ96TA0 734 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 PLVAPQ9BX97 442 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 FAM105AQ9NUU6 356 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 MTUS1Q9ULD2 1270 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 AGAP1Q9UPQ3 857 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 TLR3O15455 904 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 ZNF623O75123 536 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 PHF2O75151 1096 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 CYP1A1P04798 512 aaPredicted RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 MYBL1P10243 752 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 SKIP12755 728 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 UNGP13051 313 aaPredicted RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 PNPLA4P41247 253 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 PMS2P54278 862 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 MAGOHP61326 146 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 GPC5P78333 572 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 TRADDQ15628 312 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 DUPD1Q68J44 220 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 TAOK1Q7L7X3 1001 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 DDX42Q86XP3 938 aaKnown RBP eCLIP12.23□□□□□ -0.45
RFFL-205ENST00000415395 MAGOHBQ96A72 148 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 TLCD1Q96CP7 247 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 CHMP6Q96FZ7 201 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 ZMAT2Q96NC0 199 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 RPS6KC1Q96S38 1066 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 DPH5Q9H2P9 285 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 PABPC3Q9H361 631 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 KLC4Q9NSK0 619 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 TRMT13Q9NUP7 481 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 WBP1LQ9NX94 342 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 TAS2R14Q9NYV8 317 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 ATP8A1Q9Y2Q0 1164 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 HES2Q9Y543 173 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 HTTP42858 3142 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 SCN1AP35498 2009 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 SMIM28A0A1B0GU29 152 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 DDX3YO15523 660 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 MTA2O94776 668 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 LSM8O95777 96 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 AGTP01019 485 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 ATP5DP30049 168 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 CENPCQ03188 943 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 INCA1Q0VD86 236 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 SCARA3Q6AZY7 606 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 MRPL10Q7Z7H8 261 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 CCDC197Q8NCU1 140 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 OR2W6PQ8NHA6 318 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 RAPGEF5Q92565 580 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 VCPIP1Q96JH7 1222 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 ZNF560Q96MR9 790 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 ZNF518BQ9C0D4 1074 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 NEUROG2Q9H2A3 272 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 ACP6Q9NPH0 428 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 SLC38A7Q9NVC3 462 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
RFFL-205ENST00000415395 GTF3C4Q9UKN8 822 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 PADI3Q9ULW8 664 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 GIT1Q9Y2X7 761 aa12.23□□□□□ -0.45
RFFL-205ENST00000415395 RGS16O15492 202 aaPredicted RBP12.22□□□□□ -0.45
RFFL-205ENST00000415395 THAP12O43422 761 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 MED7O43513 233 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 CYP1A2P05177 515 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 GSTA1P08263 222 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 CKBP12277 381 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 ITGA4P13612 1032 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 AKAP5P24588 427 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 DSC3Q14574 896 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 ITIH4Q14624 930 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 LPIN1Q14693 890 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 SNCBQ16143 134 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 C9orf57Q5W0N0 161 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 SCARA5Q6ZMJ2 495 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 JAMLQ86YT9 394 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 MAGEC3Q8TD91 643 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 SH3TC2Q8TF17 1288 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 ZNF606Q8WXB4 792 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 XPO6Q96QU8 1125 aaKnown RBP12.22□□□□□ -0.45
RFFL-205ENST00000415395 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 APOL6Q9BWW8 343 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 TXLNGYQ9BZA5 131 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 THAP2Q9H0W7 228 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 WNT8AQ9H1J5 351 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 GOLPH3Q9H4A6 298 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 AGO3Q9H9G7 860 aaKnown RBP12.22□□□□□ -0.45
RFFL-205ENST00000415395 UBN1Q9NPG3 1134 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 AVENQ9NQS1 362 aaPredicted RBP12.22□□□□□ -0.45
RFFL-205ENST00000415395 SAMD15Q9P1V8 674 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 UVRAGQ9P2Y5 699 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 OGDHLQ9ULD0 1010 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 KIAA1257Q9ULG3 409 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 POLIQ9UNA4 740 aa12.22□□□□□ -0.45
RFFL-205ENST00000415395 PIRO00625 290 aa12.21□□□□□ -0.45
RFFL-205ENST00000415395 CILPO75339 1184 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms