RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 PLEKHG4Q58EX7 1191 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 AADACL2Q6P093 401 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 ZBTB8OSQ8IWT0 167 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 UBR7Q8N806 425 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.67■□□□□ 0.1
USP4-203ENST00000415188 ART4Q93070 314 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 TLCD1Q96CP7 247 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 BTBD6Q96KE9 485 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 STMN4Q9H169 189 aaPredicted RBP15.67■□□□□ 0.1
USP4-203ENST00000415188 AZI2Q9H6S1 392 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 THEGQ9P2T0 379 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 GGA2Q9UJY4 613 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 ATP8A1Q9Y2Q0 1164 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 MTCH2Q9Y6C9 303 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 REV3LO60673 3130 aa15.67■□□□□ 0.1
USP4-203ENST00000415188 NDUFAB1O14561 156 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 EFCAB14O75071 495 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 TOM1L1O75674 476 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 LSM8O95777 96 aaKnown RBP15.66■□□□□ 0.1
USP4-203ENST00000415188 RRM1P23921 792 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 RPL21P46778 160 aaKnown RBP15.66■□□□□ 0.1
USP4-203ENST00000415188 CCT5P48643 541 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 ZNF132P52740 706 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 CORO7P57737 925 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 CAV1Q03135 178 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 BYSLQ13895 437 aaKnown RBP15.66■□□□□ 0.1
USP4-203ENST00000415188 SGO2Q562F6 1265 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 TJAP1Q5JTD0 557 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 PLEKHA7Q6IQ23 1121 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 MICALCLQ6ZW33 695 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 PLPPR4Q7Z2D5 763 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 ZDHHC14Q8IZN3 488 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 RBBP8NLQ8NC74 664 aaPredicted RBP15.66■□□□□ 0.1
USP4-203ENST00000415188 OR2W6PQ8NHA6 318 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 FBXO25Q8TCJ0 367 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 PGM2Q96G03 612 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 RAD9AQ99638 391 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 CCDC113Q9H0I3 377 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 APOBEC3GQ9HC16 384 aaKnown RBP15.66■□□□□ 0.1
USP4-203ENST00000415188 ANKFY1Q9P2R3 1169 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 SLC12A6Q9UHW9 1150 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 PTPRJQ12913 1337 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
USP4-203ENST00000415188 TRANK1O15050 2925 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 TTC28Q96AY4 2481 aa15.66■□□□□ 0.1
USP4-203ENST00000415188 OGTO15294 1046 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CLDN3O15551 220 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 LPXNO60711 386 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CAND2O75155 1236 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 GAS8O95995 478 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CALB1P05937 261 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 RARGP13631 454 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CETN2P41208 172 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 SLC26A2P50443 739 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 WNT7BP56706 349 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 YWHAEP62258 255 aaKnown RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 ADCY2Q08462 1091 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CALCOCO2Q13137 446 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 NCOA4Q13772 614 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 LMBRD2Q68DH5 695 aaPredicted RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 TRMT10CQ7L0Y3 403 aaKnown RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 RHOT1Q8IXI2 618 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 ZBTB10Q96DT7 871 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 DDX27Q96GQ7 796 aaKnown RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 ZBTB45Q96K62 511 aaPredicted RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 ZNF518BQ9C0D4 1074 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 EPB41L4BQ9H329 900 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CENPHQ9H3R5 247 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 ERAP1Q9NZ08 941 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 ADAM22Q9P0K1 906 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CHORDC1Q9UHD1 332 aaPredicted RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 NRCAMQ92823 1304 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 IGKV6-21A0A0C4DH24 114 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 LINC01553A4QN01 128 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 ASS1P00966 412 aaKnown RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 ITIH2P19823 946 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 MCL1Q07820 350 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 PTK6Q13882 451 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 TFDP1Q14186 410 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 PPP1R7Q15435 360 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 GRIK4Q16099 956 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 C6orf118Q5T5N4 469 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 TMEM270Q6UE05 265 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CEP128Q6ZU80 1094 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 KATNAL2Q8IYT4 538 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 BBOF1Q8ND07 529 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 GDPD5Q8WTR4 605 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 ATXN2LQ8WWM7 1075 aaKnown RBP15.65■□□□□ 0.1
USP4-203ENST00000415188 CPA5Q8WXQ8 436 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 SEPT8Q92599 483 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CENPTQ96BT3 561 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 CYFIP2Q96F07 1278 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 FAXDC2Q96IV6 333 aa15.65■□□□□ 0.1
USP4-203ENST00000415188 TCRBV7S2A1N4TA0A589 114 aa15.64■□□□□ 0.09
USP4-203ENST00000415188 THAP12O43422 761 aa15.64■□□□□ 0.09
USP4-203ENST00000415188 FAM189A1O60320 539 aa15.64■□□□□ 0.09
USP4-203ENST00000415188 CHRNA1P02708 482 aa15.64■□□□□ 0.09
USP4-203ENST00000415188 AMHP03971 560 aa15.64■□□□□ 0.09
USP4-203ENST00000415188 PRKCBP05771 671 aa15.64■□□□□ 0.09
USP4-203ENST00000415188 POU3F3P20264 500 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms