RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GLRX5Q86SX6 157 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 PCYOX1LQ8NBM8 494 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 ATP6V1E2Q96A05 226 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 MSLNLQ96KJ4 702 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 SIN3AQ96ST3 1273 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 SENP6Q9GZR1 1112 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 KIAA1683Q9H0B3 1180 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 DHX36Q9H2U1 1008 aaKnown RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 RMI1Q9H9A7 625 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 SRP68Q9UHB9 627 aaKnown RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 FEZ2Q9UHY8 353 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 OTOFQ9HC10 1997 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 SOS1Q07889 1333 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 A0A1W2PPH5 198 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 SGSM2O43147 1006 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 GJB3O75712 270 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 SLC3A2P08195 630 aaKnown RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 OAS2P29728 719 aaKnown RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 ROM1Q03395 351 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 BTKQ06187 659 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 LRMPQ12912 555 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 ASIC2Q16515 512 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CYP27C1Q4G0S4 372 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 KLHDC10Q6PID8 442 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 Q6ZVL8 140 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 FAM20CQ8IXL6 584 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 GPC2Q8N158 579 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 PQLC1Q8N2U9 271 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 ANKRD52Q8NB46 1076 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 MDM1Q8TC05 714 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 FOXRED1Q96CU9 486 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 RMDN3Q96TC7 470 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 MPHOSPH9Q99550 1183 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 PYM1Q9BRP8 204 aaKnown RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 KATNAL1Q9BW62 490 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 TTYH3Q9C0H2 523 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 GHITMQ9H3K2 345 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 STARD7Q9NQZ5 370 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 KCND1Q9NSA2 647 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 SPATA6Q9NWH7 488 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 STOML1Q9UBI4 398 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CCDC39Q9UFE4 941 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 MEGF11A6BM72 1044 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ERVV-2B6SEH9 535 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 H7C4K7 107 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ADAMTS3O15072 1205 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 DHHO43323 396 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 F13BP05160 661 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 CEACAM5P06731 702 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 FGFR2P21802 821 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 RPS6KB1P23443 525 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 MC3RP41968 323 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 NPTX2P47972 431 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 PLCB4Q15147 1175 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 RPS6KA2Q15349 733 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 DNAJC21Q5F1R6 531 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 PRPF18Q99633 342 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 OSBPL1AQ9BXW6 950 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 C5AR2Q9P296 337 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 IGSF9Q9P2J2 1179 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 KCND3Q9UK17 655 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 PCDHGB4Q9UN71 923 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ACTL7AQ9Y615 435 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 CDY2AQ9Y6F7 541 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 COL3A1P02461 1466 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 CNTNAP5Q8WYK1 1306 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 POLR2AP24928 1970 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 MYO1CO00159 1063 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 WNT10BO00744 389 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 DHX15O43143 795 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 PHGDHO43175 533 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 DIAPH2O60879 1101 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 C4BPAP04003 597 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 CLTBP09497 229 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 NTSR1P30989 418 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 HOXC9P31274 260 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 EPHX2P34913 555 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ANTXR2P58335 489 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 RAP2BP61225 183 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 MVKQ03426 396 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 C17orf67Q0P5P2 114 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 CTBP1Q13363 440 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 FGL2Q14314 439 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 TIGD5Q53EQ6 642 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 HECTD3Q5T447 861 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 ZNF574Q6ZN55 896 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 ENOSF1Q7L5Y1 443 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 SNX32Q86XE0 403 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 CCDC117Q8IWD4 279 aaPredicted RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 NLGN4XQ8N0W4 816 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 AGBL5Q8NDL9 886 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 GIMAP7Q8NHV1 300 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 BRI3BPQ8WY22 251 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 KCNC2Q96PR1 638 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 MPHOSPH8Q99549 860 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 AP5M1Q9H0R1 490 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 RNPEPQ9H4A4 650 aa2.87□□□□□ -1.95
MCF2-204ENST00000414978 OLA1Q9NTK5 396 aaKnown RBP2.87□□□□□ -1.95
MCF2-204ENST00000414978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms