RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 KBTBD7Q8WVZ9 684 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 MRPS31Q92665 395 aaKnown RBP16.66■□□□□ 0.26
ACTB-202ENST00000414620 MYLPFQ96A32 169 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 CCDC127Q96BQ5 260 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 CHAMP1Q96JM3 812 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 CGRRF1Q99675 332 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 SYT15Q9BQS2 421 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 C8orf33Q9H7E9 229 aaPredicted RBP16.66■□□□□ 0.26
ACTB-202ENST00000414620 TRPC7Q9HCX4 862 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 SERTAD1Q9UHV2 236 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 PCDHGA2Q9Y5H1 932 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 RALGAPA1Q6GYQ0 2036 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 GABRDO14764 452 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 NOL4O94818 638 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 PCSK1P29120 753 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 AVPR1AP37288 418 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 RPL10AP62906 217 aaKnown RBP16.65■□□□□ 0.26
ACTB-202ENST00000414620 SATB1Q01826 763 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 CYP24A1Q07973 514 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 TRIM68Q6AZZ1 485 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 Q6ZS52 159 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 CELF5Q8N6W0 485 aaKnown RBP16.65■□□□□ 0.26
ACTB-202ENST00000414620 ZBTB44Q8NCP5 570 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 RIN3Q8TB24 985 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 USP13Q92995 863 aaPredicted RBP16.65■□□□□ 0.26
ACTB-202ENST00000414620 MSANTD3Q96H12 275 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 KIAA1586Q9HCI6 787 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 ABCB6Q9NP58 842 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 CRTAC1Q9NQ79 661 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 NCDNQ9UBB6 729 aa16.65■□□□□ 0.26
ACTB-202ENST00000414620 CLSTN1O94985 981 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 PDGFRBP09619 1106 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 DDX6P26196 483 aaKnown RBP eCLIP16.64■□□□□ 0.253e-35■■□□□ 11.9
ACTB-202ENST00000414620 WEE1P30291 646 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 ID4P47928 161 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 CCR3P51677 355 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 CYP27A1Q02318 531 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 LRRC32Q14392 662 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 PSMD6Q15008 389 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 HS2ST1Q7LGA3 356 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 RALGPS2Q86X27 583 aaPredicted RBP16.64■□□□□ 0.25
ACTB-202ENST00000414620 CEP57L1Q8IYX8 460 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 XXYLT1Q8NBI6 393 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 SPATA18Q8TC71 538 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 RUBCNQ92622 972 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 MRPL45Q9BRJ2 306 aaKnown RBP16.64■□□□□ 0.25
ACTB-202ENST00000414620 EBF3Q9H4W6 596 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 GKN1Q9NS71 199 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 THG1LQ9NWX6 298 aaKnown RBP16.64■□□□□ 0.25
ACTB-202ENST00000414620 CFAP45Q9UL16 551 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 SMG5Q9UPR3 1016 aaKnown RBP16.64■□□□□ 0.25
ACTB-202ENST00000414620 NME7Q9Y5B8 376 aa16.64■□□□□ 0.25
ACTB-202ENST00000414620 LILRB5O75023 590 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 CST3P01034 146 aaPredicted RBP16.63■□□□□ 0.25
ACTB-202ENST00000414620 TDGF1P13385 188 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 WARSP23381 471 aaKnown RBP16.63■□□□□ 0.25
ACTB-202ENST00000414620 BDNFP23560 247 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 CASP4P49662 377 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 MLLT6P55198 1093 aaPredicted RBP16.63■□□□□ 0.25
ACTB-202ENST00000414620 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 LPAL2Q16609 132 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 BMT2Q1RMZ1 405 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 ITPRIPL2Q3MIP1 535 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 CFAP221Q4G0U5 840 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 FAM171BQ6P995 826 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 C1orf228Q6PIY5 440 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 C4orf50Q6ZRC1 276 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 DPH6Q7L8W6 267 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 ZNF516Q92618 1163 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 NELL1Q92832 810 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 FUBP3Q96I24 572 aaKnown RBP eCLIP16.63■□□□□ 0.25
ACTB-202ENST00000414620 IER2Q9BTL4 223 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 HPS4Q9NQG7 708 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 MAGEC2Q9UBF1 373 aaPredicted RBP16.63■□□□□ 0.25
ACTB-202ENST00000414620 UXTQ9UBK9 157 aaPredicted RBP16.63■□□□□ 0.25
ACTB-202ENST00000414620 EML5Q05BV3 1969 aa16.63■□□□□ 0.25
ACTB-202ENST00000414620 A0A1B0GVL5 298 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 PVALEFA0A1B0GWK0 134 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 ACTN4O43707 911 aaKnown RBP16.62■□□□□ 0.25
ACTB-202ENST00000414620 KLRC4O43908 158 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 EXOC3O60645 756 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
ACTB-202ENST00000414620 ARSAP15289 507 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 HOXC13P31276 330 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 CXCL12P48061 93 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 TNNC1P63316 161 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 DMWDQ09019 674 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 PPP2R5DQ14738 602 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
ACTB-202ENST00000414620 MDH1BQ5I0G3 518 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 LIMS2Q7Z4I7 341 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 MON1AQ86VX9 555 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 OR6B3Q8NGW1 331 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 TRMT2BQ96GJ1 504 aaKnown RBP16.62■□□□□ 0.25
ACTB-202ENST00000414620 SLC22A12Q96S37 553 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms