RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 LRRC3Q9BY71 257 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 GCOM2Q9BZD3 368 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 GPR62Q9BZJ7 368 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SIL1Q9H173 461 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 OR10A4Q9H209 315 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 C1orf21Q9H246 121 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ADAMTS10Q9H324 1103 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 XKR8Q9H6D3 395 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 SDHAF3Q9NRP4 125 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 ADPRHL2Q9NX46 363 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 TRPM5Q9NZQ8 1165 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 EMC3Q9P0I2 261 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 EBF1Q9UH73 591 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 KLHL3Q9UH77 587 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FBXO40Q9UH90 709 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 IL19Q9UHD0 177 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 FAM153AQ9UHL3 310 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 HOOK1Q9UJC3 728 aaKnown RBP3.88□□□□□ -1.79
SF3B1-203ENST00000414174 PPT2Q9UMR5 302 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 DNM3Q9UQ16 869 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 DTNAQ9Y4J8 743 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 PCDHB2Q9Y5E7 798 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 GMEB1Q9Y692 573 aa3.88□□□□□ -1.79
SF3B1-203ENST00000414174 A0A087WV62 115 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 MYOCOSA0A1B0GUC4 107 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 A0A1W2PPH5 198 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 KRT87PA6NCN2 255 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SLC9B1P1A6NJY1 282 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 CAPN14A8MX76 684 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PRR5-ARHGAP8B1AHC4 643 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 K7ESF4 209 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PLD2O14939 933 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 NPC1O15118 1278 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TEX28O15482 410 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ZW10O43264 779 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SMAD6O43541 496 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 STRNO43815 780 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 GREM1O60565 184 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 UBOX5O94941 541 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 REC8O95072 547 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 KCNH1O95259 989 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 GJB6O95452 261 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 CYP3A4P08684 503 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 KCNA5P22460 613 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 MCM3P25205 808 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 GDI1P31150 447 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 HOXA6P31267 233 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 EVI2BP34910 448 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ACTN2P35609 894 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PPM1AP35813 382 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PSMC2P35998 433 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 EIF4A3P38919 411 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 RECQLP46063 649 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SCNN1GP51170 649 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ARHGDIBP52566 201 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 VCPP55072 806 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ARL4CP56559 192 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 EIF4A1P60842 406 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SSTP61278 116 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PHEXP78562 749 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 RBP5P82980 135 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 CBX1P83916 185 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TMPRSS15P98073 1019 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 CYP4F8P98187 520 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 PPARDQ03181 441 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SPAG1Q07617 926 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 BFSP1Q12934 665 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 CUL4AQ13619 759 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 BLMHQ13867 455 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 DHX34Q14147 1143 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 MPP2Q14168 576 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 DOC2AQ14183 400 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 GNA13Q14344 377 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TRADDQ15628 312 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TAF12Q16514 161 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ABCB5Q2M3G0 1257 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF674Q2M3X9 581 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ARL13BQ3SXY8 428 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SLC39A12Q504Y0 691 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TIGD5Q53EQ6 642 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TDRD12Q587J7 1177 aaKnown RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 SNAP47Q5SQN1 464 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 CENPPQ6IPU0 288 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 MIS18BP1Q6P0N0 1132 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TMEM154Q6P9G4 183 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 OLFM4Q6UX06 510 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 RANBP10Q6VN20 620 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ZYG11AQ6WRX3 759 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 RFX8Q6ZV50 586 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 RHOUQ7L0Q8 258 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TMPRSS7Q7RTY8 843 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 NANOGNBQ7Z5D8 188 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 HOOK3Q86VS8 718 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 TSPYL5Q86VY4 417 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ERO1BQ86YB8 467 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 ITPRIPQ8IWB1 547 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 OR2C3Q8N628 320 aa3.87□□□□□ -1.79
SF3B1-203ENST00000414174 NIPA2Q8N8Q9 360 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms