RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GDF5P43026 501 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 PRIM2P49643 509 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 ALDH5A1P51649 535 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 HNRNPMP52272 730 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 DGKEP52429 567 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 AK2P54819 239 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 NXPH1P58417 271 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 UBE4AQ14139 1066 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 PTPRRQ15256 657 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 SF3B3Q15393 1217 aaKnown RBP4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 PLA1AQ53H76 456 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 VPS53Q5VIR6 699 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 ICE2Q659A1 982 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 IL31Q6EBC2 164 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 Q6ZNX1 250 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 MPP5Q8N3R9 675 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 SDR16C5Q8N3Y7 309 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 RNF152Q8N8N0 203 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 LPIN2Q92539 896 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 FAM136AQ96C01 138 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 TBCBQ99426 244 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 CHST8Q9H2A9 424 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 TOR3AQ9H497 397 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 CYP4F11Q9HBI6 524 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 SERHLQ9NQF3 203 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 CHST12Q9NRB3 414 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZSCAN32Q9NX65 697 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 NDRG4Q9ULP0 352 aaKnown RBP4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 PADI4Q9UM07 663 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 SNX13Q9Y5W8 968 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 HS3ST3A1Q9Y663 406 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 EPN1Q9Y6I3 576 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 COL4A3Q01955 1670 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 LOC102723971A0A1B0GUV8 181 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 RASA4BC9J798 803 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 KPNA5O15131 536 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 FOXN1O15353 648 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 MPPED1O15442 326 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 RASA4O43374 803 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 MT-ND5P03915 603 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 PARP1P09874 1014 aaKnown RBP4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 KCNA3P22001 575 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 FOLR3P41439 243 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 NEK3P51956 506 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 SEC24CP53992 1094 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 MYO1EQ12965 1108 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 HDAC1Q13547 482 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 NPY5RQ15761 445 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 INSCQ1MX18 579 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 NBPF8Q3BBV2 869 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZIK1Q3SY52 487 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 DTX2Q86UW9 622 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 LDLRAD3Q86YD5 345 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZNF280BQ86YH2 543 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 B3GALNT2Q8NCR0 500 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 MYCBPAPQ8TBZ2 947 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 IPCEF1Q8WWN9 437 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 NEU4Q8WWR8 484 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC9A6Q92581 669 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC39A13Q96H72 371 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 SNX22Q96L94 193 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 PPP1R9BQ96SB3 815 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 STARD7Q9NQZ5 370 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 CAPN11Q9UMQ6 739 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 SSX2IPQ9Y2D8 614 aa4.65□□□□□ -1.67
HMGB1P11-201ENST00000413899 POM121BA6NF01 834 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 CLCA1A8K7I4 914 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 YY2O15391 372 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 PEX1O43933 1283 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 INMTO95050 263 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 CSF1RP07333 972 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 ANXA2P07355 339 aaKnown RBP4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 CARSP49589 748 aaKnown RBP4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 FOXI1Q12951 378 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 MPP3Q13368 585 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 E2F2Q14209 437 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 LONRF1Q17RB8 773 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 ARHGAP40Q5TG30 622 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 HECTD2Q5U5R9 776 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 LAIR1Q6GTX8 287 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZDHHC24Q6UX98 284 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 UNC13DQ70J99 1090 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 YAF2Q8IY57 180 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 ATP11CQ8NB49 1132 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 BEND2Q8NDZ0 799 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 SUPT20HQ8NEM7 779 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 BRI3BPQ8WY22 251 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 RAPGEF4Q8WZA2 1011 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 GJA10Q969M2 543 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 STK31Q9BXU1 1019 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 ACTRT3Q9BYD9 372 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 TPSD1Q9BZJ3 242 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 CXorf36Q9H7Y0 433 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC52A1Q9NWF4 448 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 DNMT3BQ9UBC3 853 aaKnown RBP4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 CDY1Q9Y6F8 540 aa4.64□□□□□ -1.67
HMGB1P11-201ENST00000413899 ADGRA2Q96PE1 1338 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms