RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TMEM189-UBE2V1I3L0A0 370 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 M0QZQ0 153 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CYB561D2O14569 222 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 HCRTO43612 131 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 ERBB2P04626 1255 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 IGFBP6P24592 240 aaPredicted RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 LMO2P25791 158 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 GNL1P36915 607 aaPredicted RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 FAAP100Q0VG06 881 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 PKN2Q16513 984 aaKnown RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 C12orf29Q8N999 325 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 NOA1Q8NC60 698 aaKnown RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SPATA4Q8NEY3 305 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 FNIP1Q8TF40 1166 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SLC35F5Q8WV83 523 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 MS4A14Q96JA4 679 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SENP8Q96LD8 212 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 PAAF1Q9BRP4 392 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SELENOOQ9BVL4 669 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SLC4A5Q9BY07 1137 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TRIM7Q9C029 511 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 DNAI2Q9GZS0 605 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SNX25Q9H3E2 840 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 ANKZF1Q9H8Y5 726 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 EHD2Q9NZN4 543 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CACNG4Q9UBN1 327 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 BRCA2P51587 3418 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 GREB1Q4ZG55 1949 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SIGLEC16A6NMB1 481 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 H2AFXP16104 143 aaPredicted RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CAPN2P17655 700 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 PAFAH1B1P43034 410 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 GJA8P48165 433 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TCTN1Q2MV58 587 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TEX35Q5T0J7 233 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 DNAJC24Q6P3W2 148 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CPNE8Q86YQ8 564 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 UBL4BQ8N7F7 174 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 RSPH1Q8WYR4 309 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 KRT35Q92764 455 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 C18orf8Q96DM3 657 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TNIP3Q96KP6 325 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TJP2Q9UDY2 1190 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 IP6K2Q9UHH9 426 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TBX21Q9UL17 535 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CASTOR2A6NHX0 329 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 MYO1FO00160 1098 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 PGRMC1O00264 195 aaKnown RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 ENPP3O14638 875 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 PSTPIP1O43586 416 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 PQBP1O60828 265 aaKnown RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 POMCP01189 267 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 LHX1P48742 406 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 MARCKSL1P49006 195 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 BCAT1P54687 386 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 RPL7AP62424 266 aaKnown RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 OGDHQ02218 1023 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 C2orf54Q08AI8 447 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CLUL1Q15846 466 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 PTPROQ16827 1216 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CYP4A22Q5TCH4 519 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 CCDC181Q5TID7 509 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 KIAA0319Q5VV43 1072 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 WSCD1Q658N2 575 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 GLB1LQ6UWU2 654 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TMEM110Q86TL2 294 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 COLGALT2Q8IYK4 626 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 ANKRD52Q8NB46 1076 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 B3GALNT2Q8NCR0 500 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 DBF4BQ8NFT6 615 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SEPT8Q92599 483 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 RUBCNQ92622 972 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 HNRNPABQ99729 332 aaKnown RBP5.83□□□□□ -1.48
EPHA4-202ENST00000409854 MIS12Q9H081 205 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 SMARCAL1Q9NZC9 954 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 KANSL3Q9P2N6 904 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 RAB21Q9UL25 225 aa5.83□□□□□ -1.48
EPHA4-202ENST00000409854 TARSL2A2RTX5 802 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TMEM110-MUSTN1A8MSY1 372 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 B4GALT3O60512 393 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 SCNN1AP37088 669 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PLA2G4AP47712 749 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 BST2Q10589 180 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TRIM60Q495X7 471 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TIGD5Q53EQ6 642 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 NOMO2Q5JPE7 1267 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DCLRE1AQ6PJP8 1040 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 RNF169Q8NCN4 708 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 UBA3Q8TBC4 463 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 SUSD3Q96L08 255 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 MCEEQ96PE7 176 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PKMYT1Q99640 499 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 RTP3Q9BQQ7 232 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 HIPK3Q9H422 1215 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 RBM12Q9NTZ6 932 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 FAM49BQ9NUQ9 324 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 VGLL3A8MV65 326 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms