RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
CHMP3-205ENST00000409810 CRTAC1Q9NQ79 661 aa11.62□□□□□ -0.55
CHMP3-205ENST00000409810 EHD2Q9NZN4 543 aa11.62□□□□□ -0.55
CHMP3-205ENST00000409810 CEP72Q9P209 647 aa11.62□□□□□ -0.55
CHMP3-205ENST00000409810 IGSF9Q9P2J2 1179 aa11.62□□□□□ -0.55
CHMP3-205ENST00000409810 EPS15L1Q9UBC2 864 aa11.62□□□□□ -0.55
CHMP3-205ENST00000409810 UXTQ9UBK9 157 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-205ENST00000409810 CDH7Q9ULB5 785 aa11.62□□□□□ -0.55
CHMP3-205ENST00000409810 NUP210Q8TEM1 1887 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-205ENST00000409810 DCXO43602 365 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 ATP2C2O75185 946 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 SOAT2O75908 522 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 LETM1O95202 739 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-205ENST00000409810 MYL4P12829 197 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 LAMP2P13473 410 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 ATF6P18850 670 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 CYP2F1P24903 491 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 CDC25CP30307 473 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 GRIK1P39086 918 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 MTIF2P46199 727 aaKnown RBP11.61□□□□□ -0.55
CHMP3-205ENST00000409810 NDST1P52848 882 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 KLHL40Q2TBA0 621 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 PRSS36Q5K4E3 855 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 CAVIN1Q6NZI2 390 aaKnown RBP11.61□□□□□ -0.55
CHMP3-205ENST00000409810 MTSS1LQ765P7 747 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 SCN4BQ8IWT1 228 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 ITFG1Q8TB96 612 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 ENOX1Q8TC92 643 aaKnown RBP11.61□□□□□ -0.55
CHMP3-205ENST00000409810 FGF13Q92913 245 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 ELMO3Q96BJ8 720 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 SMARCD1Q96GM5 515 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 MYADMQ96S97 322 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 MED10Q9BTT4 135 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 DPEP3Q9H4B8 488 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 CD320Q9NPF0 282 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 GDE1Q9NZC3 331 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 TMEM63CQ9P1W3 806 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 NME7Q9Y5B8 376 aa11.61□□□□□ -0.55
CHMP3-205ENST00000409810 ANAPC1Q9H1A4 1944 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 BDP1A6H8Y1 2624 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 CILPO75339 1184 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 TPM2P07951 284 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 CEBPBP17676 345 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 CD58P19256 250 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 BDNFP23560 247 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 MTMR3Q13615 1198 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 CUL2Q13617 745 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 MAN2A1Q16706 1144 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 PTPN21Q16825 1174 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 SLC5A9Q2M3M2 681 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 ARHGAP15Q53QZ3 475 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 ACOT1Q86TX2 421 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 TMC8Q8IU68 726 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 NPAS3Q8IXF0 933 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 GIPC2Q8TF65 315 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 SPATA17Q96L03 361 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 FAM81BQ96LP2 452 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 GPR88Q9GZN0 384 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 NAT10Q9H0A0 1025 aaKnown RBP11.6□□□□□ -0.55
CHMP3-205ENST00000409810 GCNT4Q9P109 453 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 LIMD1Q9UGP4 676 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 MUTYHQ9UIF7 546 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 ZMYM5Q9UJ78 669 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 NFE2L3Q9Y4A8 694 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 PATJQ8NI35 1801 aa11.6□□□□□ -0.55
CHMP3-205ENST00000409810 MYO16Q9Y6X6 1858 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 PI4K2BG5E9Z4 385 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 LRRN2O75325 713 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 DDX6P26196 483 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP3-205ENST00000409810 EEF1GP26641 437 aaKnown RBP11.59□□□□□ -0.55
CHMP3-205ENST00000409810 GABRR2P28476 465 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 GPR15P49685 360 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 CDR1P51861 262 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 TYRO3Q06418 890 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 LRMPQ12912 555 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 DDR2Q16832 855 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 SKOR2Q2VWA4 1001 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-205ENST00000409810 FAM35AQ86V20 835 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 UBALD2Q8IYN6 164 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 CRYBG2Q8N1P7 616 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 PPM1KQ8N3J5 372 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 ANKRD20A12PQ8NF67 263 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 ING5Q8WYH8 240 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 TATDN2Q93075 761 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 TRMT2BQ96GJ1 504 aaKnown RBP11.59□□□□□ -0.55
CHMP3-205ENST00000409810 C8orf48Q96LL4 319 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 MED15Q96RN5 788 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 B3GNT5Q9BYG0 378 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 ZNF518BQ9C0D4 1074 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 ATXN3LQ9H3M9 355 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 SLITRK6Q9H5Y7 841 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 CISHQ9NSE2 258 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 HMGXB4Q9UGU5 601 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 MAGED2Q9UNF1 606 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-205ENST00000409810 SORCS3Q9UPU3 1222 aa11.59□□□□□ -0.55
CHMP3-205ENST00000409810 A0A1W2PRU2 124 aa11.58□□□□□ -0.56
CHMP3-205ENST00000409810 GTPBP10A4D1E9 387 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms