RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 GNA14O95837 355 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 MBD3O95983 291 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 MAGEA11P43364 429 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 MARSP56192 900 aaKnown RBP33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 CYP27A1Q02318 531 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 MTMR3Q13615 1198 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 HTR4Q13639 388 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 RBM43Q6ZSC3 357 aaKnown RBP33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 SMOC2Q9H3U7 446 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 HMGXB4Q9UGU5 601 aa33.23■■■□□ 2.91
TRAF3IP1-203ENST00000409739 ANHXE9PGG2 379 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 FMO5P49326 533 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 SDHAF4Q5VUM1 108 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 TRIM59Q8IWR1 403 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 STKLD1Q8NE28 680 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 SHKBP1Q8TBC3 707 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 RSAD2Q8WXG1 361 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 EDAQ92838 391 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 MCRS1Q96EZ8 462 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 CYP3A43Q9HB55 503 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 C11orf16Q9NQ32 467 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 GDE1Q9NZC3 331 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 PATJQ8NI35 1801 aa33.22■■■□□ 2.91
TRAF3IP1-203ENST00000409739 FGFR1OPO95684 399 aaKnown RBP33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 GJA1P17302 382 aa33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 BDNFP23560 247 aa33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 NDST1P52848 882 aa33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 RPL10AP62906 217 aaKnown RBP33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 INCA1Q0VD86 236 aa33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 DDR2Q16832 855 aa33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 ST13P5Q8NFI4 369 aaPredicted RBP33.21■■■□□ 2.91
TRAF3IP1-203ENST00000409739 A0A1W2PRU2 124 aa33.2■■■□□ 2.91
TRAF3IP1-203ENST00000409739 VSTM1Q6UX27 236 aa33.2■■■□□ 2.91
TRAF3IP1-203ENST00000409739 GAREM2Q75VX8 874 aa33.2■■■□□ 2.91
TRAF3IP1-203ENST00000409739 FGF14Q92915 247 aa33.2■■■□□ 2.91
TRAF3IP1-203ENST00000409739 NXPE3Q969Y0 559 aa33.2■■■□□ 2.91
TRAF3IP1-203ENST00000409739 TNIP3Q96KP6 325 aa33.2■■■□□ 2.91
TRAF3IP1-203ENST00000409739 NUMBLQ9Y6R0 609 aa33.2■■■□□ 2.91
TRAF3IP1-203ENST00000409739 ORC1Q13415 861 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TDGQ13569 410 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TEAD2Q15562 447 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 PARM1Q6UWI2 310 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ACOT1Q86TX2 421 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 UNC93AQ86WB7 457 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 SCN4BQ8IWT1 228 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 FAXDC2Q96IV6 333 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 C1QTNF1Q9BXJ1 281 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 B3GNT5Q9BYG0 378 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 IL21Q9HBE4 155 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 DACH1Q9UI36 760 aa33.19■■■□□ 2.9
TRAF3IP1-203ENST00000409739 FAM86C2PA6NEL3 165 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CCDC192P0DO97 292 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 HMGA1P17096 107 aaKnown RBP33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 GABRR2P28476 465 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TAF12Q16514 161 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 WDR44Q5JSH3 913 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 MTSS1LQ765P7 747 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 UBALD2Q8IYN6 164 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ZNF518BQ9C0D4 1074 aa33.18■■■□□ 2.9
TRAF3IP1-203ENST00000409739 PMM2O15305 246 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 FGF19O95750 216 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CSH1P0DML2 217 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CSH2P0DML3 217 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TATDN2Q93075 761 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CNOT6LQ96LI5 555 aaKnown RBP33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TWNKQ96RR1 684 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ARID3AQ99856 593 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ELOVL4Q9GZR5 314 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 DUSP12Q9UNI6 340 aa33.17■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CLDN5O00501 218 aa33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CD58P19256 250 aa33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ERCC5P28715 1186 aaPredicted RBP33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 GRIK1P39086 918 aa33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ZSWIM3Q96MP5 696 aa33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 RPP25Q9BUL9 199 aaKnown RBP33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TMEM30AQ9NV96 361 aa33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 MYO16Q9Y6X6 1858 aa33.16■■■□□ 2.9
TRAF3IP1-203ENST00000409739 SLC38A8A6NNN8 435 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CILPO75339 1184 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 NOL4O94818 638 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CACNA2D1P54289 1103 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 SIGLEC14Q08ET2 396 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 KCNH2Q12809 1159 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 STXBP5Q5T5C0 1151 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TRIM67Q6ZTA4 783 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 IRF2BP1Q8IU81 584 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CRYBG2Q8N1P7 616 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 SLC44A3Q8N4M1 653 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 WHAMMQ8TF30 809 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 ATXN3LQ9H3M9 355 aa33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 MAGED2Q9UNF1 606 aaPredicted RBP33.15■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TRIM66O15016 1216 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 NARSO43776 548 aaKnown RBP33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 GPR37L1O60883 481 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CDC25CP30307 473 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 FAM78AQ5JUQ0 283 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 CCDC183Q5T5S1 534 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 FAM35AQ86V20 835 aa33.14■■■□□ 2.9
TRAF3IP1-203ENST00000409739 TRMT2BQ96GJ1 504 aaKnown RBP33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms