RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 INVSQ9Y283 1065 aa18.22■□□□□ 0.51
SCRN1-203ENST00000409570 PLXND1Q9Y4D7 1925 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 FASNP49327 2511 aaKnown RBP18.21■□□□□ 0.51
SCRN1-203ENST00000409570 TISP43B9A030 160 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 TRAK2O60296 914 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 PRPF40AO75400 957 aaKnown RBP18.21■□□□□ 0.51
SCRN1-203ENST00000409570 FAM13AO94988 1023 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 SPINK2P20155 84 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 GBP1P32455 592 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 DGKEP52429 567 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 GTF2BQ00403 316 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 FAM160A1Q05DH4 1040 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 SH3PXD2AQ5TCZ1 1133 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 DAB2IPQ5VWQ8 1189 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 PMS2CLQ68D20 193 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 EFCAB13Q8IY85 973 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 OSCP1Q8WVF1 389 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 EXOC4Q96A65 974 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 SLC22A12Q96S37 553 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 PARVGQ9HBI0 331 aa18.21■□□□□ 0.51
SCRN1-203ENST00000409570 DUS2Q9NX74 493 aaKnown RBP18.21■□□□□ 0.51
SCRN1-203ENST00000409570 ADAMTS9Q9P2N4 1935 aa18.2■□□□□ 0.5
SCRN1-203ENST00000409570 KPNA7A9QM74 516 aa18.2■□□□□ 0.5
SCRN1-203ENST00000409570 SEC24BO95487 1268 aa18.2■□□□□ 0.5
SCRN1-203ENST00000409570 TOP3BO95985 862 aaKnown RBP18.2■□□□□ 0.5
SCRN1-203ENST00000409570 USP4Q13107 963 aa18.2■□□□□ 0.5
SCRN1-203ENST00000409570 PSMD2Q13200 908 aa18.2■□□□□ 0.5
SCRN1-203ENST00000409570 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
SCRN1-203ENST00000409570 EML3Q32P44 896 aa18.2■□□□□ 0.5
SCRN1-203ENST00000409570 WNT6Q9Y6F9 365 aa18.2■□□□□ 0.5
SCRN1-203ENST00000409570 PATE3B3GLJ2 98 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 CDX4O14627 284 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 KHNYNO15037 678 aaKnown RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 NOL4O94818 638 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 HOXB3P14651 431 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 BCKDHBP21953 392 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 IFNAR2P48551 515 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 TSPY1Q01534 308 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 COL9A2Q14055 689 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 NFE2Q16621 373 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 DDR2Q16832 855 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 SV2CQ496J9 727 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 RILPL1Q5EBL4 403 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 ADALQ6DHV7 355 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 CRELD2Q6UXH1 353 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 TSTD1Q8NFU3 115 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 LEO1Q8WVC0 666 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 ATP2A3Q93084 1043 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 TRMT2BQ96GJ1 504 aaKnown RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 MYRFLQ96LU7 910 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 CYP2S1Q96SQ9 504 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 ADAM33Q9BZ11 813 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 TPSD1Q9BZJ3 242 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 TMEM206Q9H813 350 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 TRPC7Q9HCX4 862 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 TMEM9BQ9NQ34 198 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 BLOC1S4Q9NUP1 217 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 UXTQ9UBK9 157 aaPredicted RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 AGO2Q9UKV8 859 aaKnown RBP18.19■□□□□ 0.5
SCRN1-203ENST00000409570 STYXL1Q9Y6J8 313 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 DMXL2Q8TDJ6 3036 aa18.19■□□□□ 0.5
SCRN1-203ENST00000409570 ANTXRLA6NF34 631 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 USP17L7P0C7H9 530 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 CEACAM1P13688 526 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 CSRP1P21291 193 aaKnown RBP18.18■□□□□ 0.5
SCRN1-203ENST00000409570 CYP2F1P24903 491 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 POU5F1Q01860 360 aaKnown RBP18.18■□□□□ 0.5
SCRN1-203ENST00000409570 ZC2HC1CQ53FD0 456 aaPredicted RBP18.18■□□□□ 0.5
SCRN1-203ENST00000409570 USP39Q53GS9 565 aaKnown RBP18.18■□□□□ 0.5
SCRN1-203ENST00000409570 ARL6IP4Q66PJ3 421 aaKnown RBP18.18■□□□□ 0.5
SCRN1-203ENST00000409570 C11orf74Q86VG3 221 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 RASSF3Q86WH2 238 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 USP33Q8TEY7 942 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 GATA6Q92908 595 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 ZNF560Q96MR9 790 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 PKMYT1Q99640 499 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 IKZF4Q9H2S9 585 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 GCNT4Q9P109 453 aa18.18■□□□□ 0.5
SCRN1-203ENST00000409570 DSPP15924 2871 aaKnown RBP18.17■□□□□ 0.5
SCRN1-203ENST00000409570 TRAV19A0A0A6YYK7 116 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 SLC26A4O43511 780 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 RPL10AP62906 217 aaKnown RBP18.17■□□□□ 0.5
SCRN1-203ENST00000409570 IRX4P78413 519 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 MCM6Q14566 821 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 MCTP1Q6DN14 999 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 SLFN12LQ6IEE8 588 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 CYP2U1Q7Z449 544 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 PDCL2Q8N4E4 241 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 TTC16Q8NEE8 873 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 ACBD6Q9BR61 282 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 LINC00597Q9H2U6 94 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 ZHX3Q9H4I2 956 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 ABCB6Q9NP58 842 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 L1RE1Q9UN81 338 aa18.17■□□□□ 0.5
SCRN1-203ENST00000409570 K7EQS6 105 aa18.16■□□□□ 0.5
SCRN1-203ENST00000409570 CKMP06732 381 aa18.16■□□□□ 0.5
SCRN1-203ENST00000409570 TCF3P15923 654 aa18.16■□□□□ 0.5
SCRN1-203ENST00000409570 ACAT1P24752 427 aaKnown RBP18.16■□□□□ 0.5
SCRN1-203ENST00000409570 ABCD1P33897 745 aa18.16■□□□□ 0.5
SCRN1-203ENST00000409570 OPRD1P41143 372 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms