RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CEP85LQ5SZL2 805 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 TWF2Q6IBS0 349 aaKnown RBP21.83■■□□□ 1.09
USP39-203ENST00000409470 SYDE1Q6ZW31 735 aaPredicted RBP21.83■■□□□ 1.09
USP39-203ENST00000409470 ACOT1Q86TX2 421 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 EMC1Q8N766 993 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 FNIP1Q8TF40 1166 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 ASIC3Q9UHC3 531 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 IPPQ9Y573 584 aa21.83■■□□□ 1.09
USP39-203ENST00000409470 PPFIA2O75334 1257 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 GAS8O95995 478 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 KRT10P13645 584 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 FLT3LGP49771 235 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 CCNG2Q16589 344 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 NBPF20Q3BBV1 942 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 FAM102AQ5T9C2 384 aaPredicted RBP21.82■■□□□ 1.08
USP39-203ENST00000409470 TXNRD3NBQ6F5E7 133 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 MFSD7Q6UXD7 560 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 OR6B3Q8NGW1 331 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 ATL2Q8NHH9 583 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 ACSF2Q96CM8 615 aaPredicted RBP21.82■■□□□ 1.08
USP39-203ENST00000409470 MCRS1Q96EZ8 462 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 GOLGA6L10A6NI86 522 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 COPS2P61201 443 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 MRPS6P82932 125 aaKnown RBP21.82■■□□□ 1.08
USP39-203ENST00000409470 CALCOCO2Q13137 446 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 HADHQ16836 314 aaKnown RBP21.82■■□□□ 1.08
USP39-203ENST00000409470 FBXO47Q5MNV8 452 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 SPOCD1Q6ZMY3 1216 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 FAM228AQ86W67 206 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 FAM118BQ9BPY3 351 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 MIS12Q9H081 205 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 GTF2IRD1Q9UHL9 959 aa21.82■■□□□ 1.08
USP39-203ENST00000409470 LRRD1A4D1F6 860 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 PIK3R2O00459 728 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 TJP3O95049 919 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 KCNE1P15382 129 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 FAM47CQ5HY64 1035 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 PPP1R26Q5T8A7 1209 aaPredicted RBP21.81■■□□□ 1.08
USP39-203ENST00000409470 OR2W6PQ8NHA6 318 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 RAPGEF5Q92565 580 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 ZNF560Q96MR9 790 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 TSPAN18Q96SJ8 248 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 ZWILCHQ9H900 591 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 FAM49BQ9NUQ9 324 aa21.81■■□□□ 1.08
USP39-203ENST00000409470 PIRO00625 290 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 LRCH4O75427 683 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 RARBP10826 455 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 SOWAHAQ2M3V2 549 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 KCTD16Q68DU8 428 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 OR6B2Q6IFH4 312 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 POLNQ7Z5Q5 900 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 RSPH3Q86UC2 560 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 SMG8Q8ND04 991 aaKnown RBP21.8■■□□□ 1.08
USP39-203ENST00000409470 ART4Q93070 314 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 TXLNGYQ9BZA5 131 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 CDY2AQ9Y6F7 541 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 A8MXQ7 604 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 H0YGN5 161 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 KRT7P08729 469 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 PTK6Q13882 451 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 TRIP13Q15645 432 aaPredicted RBP21.8■■□□□ 1.08
USP39-203ENST00000409470 XKR4Q5GH76 650 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 SPDYCQ5MJ68 293 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 UNC93AQ86WB7 457 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 HESX1Q9UBX0 185 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 TRPV2Q9Y5S1 764 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 NFS1Q9Y697 457 aa21.8■■□□□ 1.08
USP39-203ENST00000409470 KPNA7A9QM74 516 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 E5RJQ4 531 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 PFKMP08237 780 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 PNPLA4P41247 253 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 RGS7P49802 495 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 PMS2P54278 862 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 SLC25A11Q02978 314 aaKnown RBP21.79■■□□□ 1.08
USP39-203ENST00000409470 TFDP3Q5H9I0 405 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 GDF6Q6KF10 455 aaPredicted RBP21.79■■□□□ 1.08
USP39-203ENST00000409470 FAM129AQ9BZQ8 928 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 UPF3AQ9H1J1 476 aaKnown RBP21.79■■□□□ 1.08
USP39-203ENST00000409470 GOLGA2P5Q9HBQ8 144 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 WHRNQ9P202 907 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 NME7Q9Y5B8 376 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 PDCD11Q14690 1871 aaKnown RBP21.79■■□□□ 1.08
USP39-203ENST00000409470 SEPT4O43236 478 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 RNF8O76064 485 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 MYCNP04198 464 aaPredicted RBP21.79■■□□□ 1.08
USP39-203ENST00000409470 MYZAPP0CAP1 466 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 PRKCZQ05513 592 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 ADCY2Q08462 1091 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 TRIM32Q13049 653 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 SMTNL2Q2TAL5 461 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 FAM183BPQ6ZVS7 135 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 ZNF365Q70YC5 407 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 ARFGAP1Q8N6T3 406 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 ARRDC4Q8NCT1 418 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 CENPHQ9H3R5 247 aa21.79■■□□□ 1.08
USP39-203ENST00000409470 hCG_1818297A0A087WSY0 165 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 RPS6KA5O75582 802 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 ALDH1A1P00352 501 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 CTSHP09668 335 aa21.78■■□□□ 1.08
USP39-203ENST00000409470 ATF2P15336 505 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms