RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 CNPP09543 421 aaKnown RBP21.73■■□□□ 1.07
VSX1-203ENST00000409285 CD19P15391 556 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 BRD2P25440 801 aaKnown RBP21.73■■□□□ 1.07
VSX1-203ENST00000409285 MDH1BQ5I0G3 518 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 PPP1R26Q5T8A7 1209 aaPredicted RBP21.73■■□□□ 1.07
VSX1-203ENST00000409285 GDPD5Q8WTR4 605 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 MYLPFQ96A32 169 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 CYFIP2Q96F07 1278 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 EMILIN2Q9BXX0 1053 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 HAUS4Q9H6D7 363 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 ARHGAP20Q9P2F6 1191 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 MYO16Q9Y6X6 1858 aa21.73■■□□□ 1.07
VSX1-203ENST00000409285 WDR27A2RRH5 827 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 ADAM12O43184 909 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 ABLIM3O94929 683 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 ADH1AP07327 375 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 CPB1P15086 417 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 OR1D2P34982 312 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 MAPK8IP2Q13387 824 aaPredicted RBP21.72■■□□□ 1.07
VSX1-203ENST00000409285 SLC39A12Q504Y0 691 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 PLPP4Q5VZY2 271 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 ZNF461Q8TAF7 563 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 OLIG1Q8TAK6 271 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 SPPL2BQ8TCT7 592 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 TTYH1Q9H313 450 aaPredicted RBP21.72■■□□□ 1.07
VSX1-203ENST00000409285 FAM49BQ9NUQ9 324 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 TMLHEQ9NVH6 421 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 ATP8B3O60423 1300 aa21.72■■□□□ 1.07
VSX1-203ENST00000409285 OR4Q2P0C623 313 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 RPL17P18621 184 aaKnown RBP21.71■■□□□ 1.07
VSX1-203ENST00000409285 IRS1P35568 1242 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 PTPROQ16827 1216 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 CCDC142Q17RM4 750 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 TRIM72Q6ZMU5 477 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 PAQR9Q6ZVX9 377 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 TMEM139Q8IV31 216 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 DEFB123Q8N688 67 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 SLC2A14Q8TDB8 520 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 SLC20A1Q8WUM9 679 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 MRPL38Q96DV4 380 aaKnown RBP21.71■■□□□ 1.07
VSX1-203ENST00000409285 AGPAT1Q99943 283 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 B3GNT5Q9BYG0 378 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 LHX5Q9H2C1 402 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 TSPAN16Q9UKR8 245 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 MTMR11A4FU01 709 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 HIDE1A8MVS5 230 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 CCDC130P13994 396 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 ATF2P15336 505 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 CHRNB2P17787 502 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 CDH5P33151 784 aaPredicted RBP21.71■■□□□ 1.07
VSX1-203ENST00000409285 MAGEA11P43364 429 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 FMO1Q01740 532 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 PKDCCQ504Y2 493 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 TDRD12Q587J7 1177 aaKnown RBP21.71■■□□□ 1.07
VSX1-203ENST00000409285 Q7L0L9 218 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 ZNF571Q7Z3V5 609 aaPredicted RBP21.71■■□□□ 1.07
VSX1-203ENST00000409285 FAM35AQ86V20 835 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 ANKRD52Q8NB46 1076 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 CCDC112Q8NEF3 446 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 SMARCD1Q96GM5 515 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 KLHL5Q96PQ7 755 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 LPIN3Q9BQK8 851 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 AFF4Q9UHB7 1163 aaKnown RBP21.71■■□□□ 1.07
VSX1-203ENST00000409285 PCDHB5Q9Y5E4 795 aa21.71■■□□□ 1.07
VSX1-203ENST00000409285 DENND4CQ5VZ89 1909 aa21.7■■□□□ 1.07
VSX1-203ENST00000409285 VNN2O95498 520 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 LSM8O95777 96 aaKnown RBP21.7■■□□□ 1.06
VSX1-203ENST00000409285 CALCAP01258 141 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 MMEP08473 750 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 SKILP12757 684 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 BCAT1P54687 386 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 CYP27A1Q02318 531 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 ASTE1Q2TB18 679 aaPredicted RBP21.7■■□□□ 1.06
VSX1-203ENST00000409285 CYP26C1Q6V0L0 522 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 VPS36Q86VN1 386 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 TMTC1Q8IUR5 882 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 SPATA2LQ8IUW3 424 aaPredicted RBP21.7■■□□□ 1.06
VSX1-203ENST00000409285 LRRC8AQ8IWT6 810 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 FAM161BQ96MY7 647 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 BAG1Q99933 345 aaPredicted RBP21.7■■□□□ 1.06
VSX1-203ENST00000409285 CSNK1G1Q9HCP0 422 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 LMCD1Q9NZU5 365 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 HESX1Q9UBX0 185 aa21.7■■□□□ 1.06
VSX1-203ENST00000409285 OBSL1O75147 1896 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 MICAL2O94851 1124 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 PLEKP08567 350 aaPredicted RBP21.69■■□□□ 1.06
VSX1-203ENST00000409285 GOLGA7BQ2TAP0 167 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 VSTM1Q6UX27 236 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 RNF19BQ6ZMZ0 732 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 TTC30AQ86WT1 665 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 GPIHBP1Q8IV16 184 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 MICAL1Q8TDZ2 1067 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 CHP1Q99653 195 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 DUSP16Q9BY84 665 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 ZNF518BQ9C0D4 1074 aa21.69■■□□□ 1.06
VSX1-203ENST00000409285 PRRC2BQ5JSZ5 2229 aaKnown RBP21.69■■□□□ 1.06
VSX1-203ENST00000409285 FAM200BP0CF97 657 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 SETSIPP0DME0 302 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 NPR3P17342 541 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 DEKP35659 375 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms