RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 HDAC7Q8WUI4 952 aa11.13□□□□□ -0.63
PBRM1-205ENST00000409057 ATG4CQ96DT6 458 aa11.13□□□□□ -0.63
PBRM1-205ENST00000409057 ASIC4Q96FT7 647 aa11.13□□□□□ -0.63
PBRM1-205ENST00000409057 TRIM45Q9H8W5 580 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-205ENST00000409057 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
PBRM1-205ENST00000409057 TBX20Q9UMR3 447 aa11.13□□□□□ -0.63
PBRM1-205ENST00000409057 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
PBRM1-205ENST00000409057 BAZ2BQ9UIF8 2168 aaKnown RBP11.12□□□□□ -0.63
PBRM1-205ENST00000409057 CCDC78A2IDD5 438 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 EEF2KO00418 725 aaKnown RBP11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ZBTB39O15060 712 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 PDE5AO76074 875 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ALBP02768 609 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 RARBP10826 455 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ZNF844Q08AG5 666 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 CCNG2Q16589 344 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 RRM2BQ7LG56 351 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 TMC3Q7Z5M5 1100 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ZNF446Q9NWS9 450 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 SCN3BQ9NY72 215 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 DCDC2Q9UHG0 476 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 WDR47O94967 919 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 IL18RAPO95256 599 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 CYP11B1P15538 503 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ATP6V1E1P36543 226 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 PTGER2P43116 358 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 CLK1P49759 484 aaKnown RBP11.12□□□□□ -0.63
PBRM1-205ENST00000409057 MCL1Q07820 350 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 NFIAQ12857 509 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 RASA2Q15283 850 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ATF7IP2Q5U623 682 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ATPAF2Q8N5M1 289 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 RHBDL2Q9NX52 303 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 TAGLN3Q9UI15 199 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 SLC39A10Q9ULF5 831 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 TM9SF1O15321 606 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
PBRM1-205ENST00000409057 SREBF1P36956 1147 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 CASP7P55210 303 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 CUL2Q13617 745 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 IER5Q5VY09 327 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 C11orf63Q6NUN7 778 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 TTC23LQ6PF05 361 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 LAYNQ6UX15 382 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 EFL1Q7Z2Z2 1120 aaKnown RBP11.12□□□□□ -0.63
PBRM1-205ENST00000409057 SHCBP1Q8NEM2 672 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 SNRNP27Q8WVK2 155 aaKnown RBP11.12□□□□□ -0.63
PBRM1-205ENST00000409057 JADE3Q92613 823 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 TAAR1Q96RJ0 339 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 PAFAH2Q99487 392 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 NAALADL1Q9UQQ1 740 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 C15orf41Q9Y2V0 281 aa11.12□□□□□ -0.63
PBRM1-205ENST00000409057 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
PBRM1-205ENST00000409057 E2F8A0AVK6 867 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 ZSCAN5CA6NGD5 496 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-205ENST00000409057 PYGLP06737 847 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 ACADSBP45954 432 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 KCNK10P57789 538 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 GIT2Q14161 759 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 TFDP3Q5H9I0 405 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 FOXR1Q6PIV2 292 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 GPR141Q7Z602 305 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 ADGRA1Q86SQ6 560 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 TXNRD3Q86VQ6 643 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 MICU2Q8IYU8 434 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 URGCPQ8TCY9 931 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 WNK4Q96J92 1243 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.11□□□□□ -0.63
PBRM1-205ENST00000409057 PRMT7Q9NVM4 692 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-205ENST00000409057 AGLP35573 1532 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 CLPTM1O96005 669 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 ITGA4P13612 1032 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 PSMC3P17980 439 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 AQP5P55064 265 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 CDC42EP1Q00587 391 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 RUNX1T1Q06455 604 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 KRT33BQ14525 404 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 RNF219Q5W0B1 726 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-205ENST00000409057 NAIF1Q69YI7 327 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-205ENST00000409057 NAPEPLDQ6IQ20 393 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 IZUMO2Q6UXV1 221 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 APPL2Q8NEU8 664 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 PGM2Q96G03 612 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 NAT9Q9BTE0 207 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
PBRM1-205ENST00000409057 FAM49BQ9NUQ9 324 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 LRCH1Q9Y2L9 728 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 RIPK2O43353 540 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 SLIT1O75093 1534 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 ZC3H11AO75152 810 aaKnown RBP eCLIP11.11□□□□□ -0.63
PBRM1-205ENST00000409057 PDGFRBP09619 1106 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 FDFT1P37268 417 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 SLC26A11Q86WA9 606 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 CBWD2Q8IUF1 395 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 FUKQ8N0W3 1084 aa11.11□□□□□ -0.63
PBRM1-205ENST00000409057 ZNF786Q8N393 782 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms