RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 CEP57Q86XR8 500 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 PALB2Q86YC2 1186 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 SLC22A17Q8WUG5 538 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 TATDN2Q93075 761 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 KREMEN1Q96MU8 473 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 PAAF1Q9BRP4 392 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 PI4K2AQ9BTU6 479 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 CXCL16Q9H2A7 254 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 ADAMTS1Q9UHI8 967 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 ITGA11Q9UKX5 1188 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 REXO2Q9Y3B8 237 aaKnown RBP17.8■□□□□ 0.44
CGREF1-206ENST00000405600 NR2E1Q9Y466 385 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 MYH10P35580 1976 aa17.8■□□□□ 0.44
CGREF1-206ENST00000405600 TRAPPC3O43617 180 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 KRT5P13647 590 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
CGREF1-206ENST00000405600 MTHFRP42898 656 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 PDE6CP51160 858 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 CLCN4P51793 760 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 IFI16Q16666 785 aaKnown RBP17.79■□□□□ 0.44
CGREF1-206ENST00000405600 ZNF699Q32M78 642 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 USP41Q3LFD5 358 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 DCLRE1AQ6PJP8 1040 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 SYT10Q6XYQ8 523 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 EFCAB13Q8IY85 973 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 RNF168Q8IYW5 571 aaPredicted RBP17.79■□□□□ 0.44
CGREF1-206ENST00000405600 RIN2Q8WYP3 895 aaPredicted RBP17.79■□□□□ 0.44
CGREF1-206ENST00000405600 AGPAT1Q99943 283 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 NIF3L1Q9GZT8 377 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 FAM124BQ9H5Z6 455 aaPredicted RBP17.79■□□□□ 0.44
CGREF1-206ENST00000405600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.79■□□□□ 0.44
CGREF1-206ENST00000405600 DNAI1Q9UI46 699 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 GUCA1BQ9UMX6 200 aa17.79■□□□□ 0.44
CGREF1-206ENST00000405600 A0A087X0T9 212 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 TEX28O15482 410 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 B3GAT3O94766 335 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 KIF4AO95239 1232 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 ADH1AP07327 375 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 KRT19P08727 400 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 FAM228BP0C875 321 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 RPL17P18621 184 aaKnown RBP17.78■□□□□ 0.44
CGREF1-206ENST00000405600 ARHGAP25P42331 645 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 MYL6P60660 151 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 RBP5P82980 135 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 DSG1Q02413 1049 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 ZNF667Q5HYK9 610 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 ALKBH5Q6P6C2 394 aaKnown RBP17.78■□□□□ 0.44
CGREF1-206ENST00000405600 ELMSAN1Q6PJG2 1045 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 ZNF677Q86XU0 584 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 TTC39CQ8N584 583 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 RNF10Q8N5U6 811 aaKnown RBP17.78■□□□□ 0.44
CGREF1-206ENST00000405600 BEST2Q8NFU1 509 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 FEZF2Q8TBJ5 459 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 KIF12Q96FN5 646 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 NECTIN4Q96NY8 510 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 NAGPAQ9UK23 515 aa17.78■□□□□ 0.44
CGREF1-206ENST00000405600 LILRB3O75022 631 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 EFEMP2O95967 443 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 NFICP08651 508 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 H2AFZP0C0S5 128 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 MYO1EQ12965 1108 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 TUBB2AQ13885 445 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 UPP1Q16831 310 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 ZNF569Q5MCW4 686 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 KIAA0319Q5VV43 1072 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 PPP1R2P3Q6NXS1 205 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 H2AFVQ71UI9 128 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 GPIHBP1Q8IV16 184 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 EDAQ92838 391 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 SECISBP2LQ93073 1101 aaKnown RBP17.77■□□□□ 0.44
CGREF1-206ENST00000405600 ZMAT2Q96NC0 199 aaKnown RBP17.77■□□□□ 0.44
CGREF1-206ENST00000405600 ALS2CR12Q96Q35 445 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 TUBB2BQ9BVA1 445 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.44
CGREF1-206ENST00000405600 CHST7Q9NS84 486 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 SEPT11Q9NVA2 429 aaKnown RBP17.77■□□□□ 0.44
CGREF1-206ENST00000405600 DPP3Q9NY33 737 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 DPP7Q9UHL4 492 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 UBQLN1Q9UMX0 589 aaKnown RBP17.77■□□□□ 0.44
CGREF1-206ENST00000405600 PCDHB4Q9Y5E5 795 aa17.77■□□□□ 0.44
CGREF1-206ENST00000405600 C2CD4DB7Z1M9 353 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 PODXLO00592 558 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 ZNF263O14978 683 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 CYP26A1O43174 497 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 TACC1O75410 805 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
CGREF1-206ENST00000405600 GLUD1P00367 558 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 PNMA6AP0CW24 399 aaPredicted RBP17.76■□□□□ 0.43
CGREF1-206ENST00000405600 CYP3A5P20815 502 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 CLCNKBP51801 687 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 ZXDAP98168 799 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 FAM171A1Q5VUB5 890 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 PRSS55Q6UWB4 352 aaPredicted RBP17.76■□□□□ 0.43
CGREF1-206ENST00000405600 HFE2Q6ZVN8 426 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 SLC30A5Q8TAD4 765 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 KAT5Q92993 513 aa17.76■□□□□ 0.43
CGREF1-206ENST00000405600 CALR3Q96L12 384 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms