RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 ATICP31939 592 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 TNFAIP2Q03169 654 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 TTLL12Q14166 644 aaPredicted RBP17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 SMTNL2Q2TAL5 461 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 CCDC77Q9BR77 488 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 KDM4CQ9H3R0 1056 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 ASB7Q9H672 318 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 SAYSD1Q9NPB0 183 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 RNF181Q9P0P0 153 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 ACTL7BQ9Y614 415 aa17.09■□□□□ 0.33
CDKN1A-203ENST00000405375 VIMP08670 466 aaKnown RBP17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 BRAFP15056 766 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 GABRB2P47870 512 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 LAMC2Q13753 1193 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 SLC10A6Q3KNW5 377 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 TAPT1Q6NXT6 567 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 BBS12Q6ZW61 710 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 EMC1Q8N766 993 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 ANKS4BQ8N8V4 417 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 MAML1Q92585 1016 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 CFAP57Q96MR6 1250 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 ZWILCHQ9H900 591 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 CYP3A43Q9HB55 503 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 TBK1Q9UHD2 729 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 SHOC2Q9UQ13 582 aa17.08■□□□□ 0.33
CDKN1A-203ENST00000405375 MAGEB2O15479 319 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 MICAL2O94851 1124 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 ARF4P18085 180 aaPredicted RBP17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 KDELR1P24390 212 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 GCAP28676 217 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 FASTKD3Q14CZ7 662 aaKnown RBP17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 RIBC1Q8N443 379 aaPredicted RBP17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 ACTL9Q8TC94 416 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 MGARPQ8TDB4 240 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 MCRS1Q96EZ8 462 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 TTC25Q96NG3 672 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 ELAC2Q9BQ52 826 aaKnown RBP17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 METTL5Q9NRN9 209 aaKnown RBP17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 SAMD15Q9P1V8 674 aa17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 SAE1Q9UBE0 346 aaPredicted RBP17.08■□□□□ 0.32
CDKN1A-203ENST00000405375 CCT8L1PA6NM43 557 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 H0YHG0 523 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 GHRP10912 638 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 GJA5P36382 358 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 GPD2P43304 727 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 PSMC4P43686 418 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 OTUD4Q01804 1114 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 HADHQ16836 314 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 ILDR2Q71H61 639 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 PRCCQ92733 491 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 CPB2Q96IY4 423 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 PPP1R16BQ96T49 567 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 FRMD8P1Q9BZ68 369 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 NSRP1Q9H0G5 558 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 KCNK9Q9NPC2 374 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 FARP1Q9Y4F1 1045 aaPredicted RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 SGK1O00141 431 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 ALOX15BO15296 676 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 SNX3O60493 162 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 CST8O60676 142 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 GH1P01241 217 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 YBX3P16989 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 PLCB3Q01970 1234 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 TDRPQ86YL5 185 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 SRRM1Q8IYB3 904 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 DYDC1Q8WWB3 177 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 CKAP2Q8WWK9 683 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 SYNCQ9H7C4 482 aa17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.07■□□□□ 0.32
CDKN1A-203ENST00000405375 IFNB1P01574 187 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 HMGCRP04035 888 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 CD48P09326 243 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 CYP2C8P10632 490 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 SCTRP47872 440 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 ZNF792Q3KQV3 632 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 ANKRD42Q8N9B4 389 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 TTC13Q8NBP0 860 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 PPTC7Q8NI37 304 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 AKT3Q9Y243 479 aa17.06■□□□□ 0.32
CDKN1A-203ENST00000405375 EXOC1LA0A1B0GW35 172 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 TCP11X1B4DZS4 312 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 NDC80O14777 642 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 VTNP04004 478 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 HNRNPH1P31943 449 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 GDF10P55107 478 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 DYNLT1P63172 113 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 INCA1Q0VD86 236 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 ACAP1Q15027 740 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 EMID1Q96A84 441 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 HPDLQ96IR7 371 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 C16orf70Q9BSU1 422 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 SYT17Q9BSW7 474 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms