RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 RNASEH1O60930 286 aaKnown RBP16.29■□□□□ 0.2
ATG4B-205ENST00000404914 DNAJC6O75061 913 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 GSTA2P09210 222 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 ETV4P43268 484 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 STAT2P52630 851 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 RBM5P52756 815 aaKnown RBP eCLIP16.29■□□□□ 0.22e-12■■■□□ 18.6
ATG4B-205ENST00000404914 CUL3Q13618 768 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 SPOCD1Q6ZMY3 1216 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 CDHR3Q6ZTQ4 885 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 PYROXD1Q8WU10 500 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 CPT1BQ92523 772 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 VPS11Q9H270 941 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 FBXO28Q9NVF7 368 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-205ENST00000404914 PCDHB2Q9Y5E7 798 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 PTPRJQ12913 1337 aa16.29■□□□□ 0.2
ATG4B-205ENST00000404914 TMEM63AO94886 807 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 P4HBP07237 508 aaKnown RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 MAPTP10636 758 aaKnown RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 ANPEPP15144 967 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 YWHABP31946 246 aaKnown RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 VCPP55072 806 aaKnown RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 RIPOR1Q6ZS17 1223 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 PPFIBP2Q8ND30 876 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 FAM81BQ96LP2 452 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 MFSD14AQ96MC6 490 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 TTC1Q99614 292 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 ZNF212Q9UDV6 495 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 ASTN2O75129 1339 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 NPTX2P47972 431 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 GCNT1Q02742 428 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 MCL1Q07820 350 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 PLEKHA7Q6IQ23 1121 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 DRAXINQ8NBI3 349 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 FAM213AQ9BRX8 229 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 ASCC2Q9H1I8 757 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 DBNDD1Q9H9R9 158 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 LPXNO60711 386 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 FAM155BO75949 473 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 DHRS4L1P0CG22 281 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 PSMC5P62195 406 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 KDSRQ06136 332 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 ACSS3Q9H6R3 686 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 SSU72Q9NP77 194 aaKnown RBP16.28■□□□□ 0.2
ATG4B-205ENST00000404914 GINM1Q9NU53 330 aa16.28■□□□□ 0.2
ATG4B-205ENST00000404914 ACO1P21399 889 aaKnown RBP16.27■□□□□ 0.2
ATG4B-205ENST00000404914 FAAP100Q0VG06 881 aa16.27■□□□□ 0.2
ATG4B-205ENST00000404914 BBS9Q3SYG4 887 aa16.27■□□□□ 0.2
ATG4B-205ENST00000404914 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
ATG4B-205ENST00000404914 SP8Q8IXZ3 490 aa16.27■□□□□ 0.2
ATG4B-205ENST00000404914 PHACTR1Q9C0D0 580 aa16.27■□□□□ 0.2
ATG4B-205ENST00000404914 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
ATG4B-205ENST00000404914 APOBEC3GQ9HC16 384 aaKnown RBP16.27■□□□□ 0.2
ATG4B-205ENST00000404914 C1orf112Q9NSG2 853 aa16.27■□□□□ 0.2
ATG4B-205ENST00000404914 DDX43Q9NXZ2 648 aaKnown RBP16.27■□□□□ 0.2
ATG4B-205ENST00000404914 SHOC2Q9UQ13 582 aa16.27■□□□□ 0.2
ATG4B-205ENST00000404914 hCG_1818297A0A087WSY0 165 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 BAG2O95816 211 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.19
ATG4B-205ENST00000404914 PYGBP11216 843 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 KRT72Q14CN4 511 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 DLGAP5Q15398 846 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 LRRC36Q1X8D7 754 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 TMEM270Q6UE05 265 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 RAPH1Q70E73 1250 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 ARHGAP22Q7Z5H3 698 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 MAP4K3Q8IVH8 894 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 FEZF2Q8TBJ5 459 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 RBM41Q96IZ5 413 aaKnown RBP16.27■□□□□ 0.19
ATG4B-205ENST00000404914 EBF3Q9H4W6 596 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 MARCOQ9UEW3 520 aaPredicted RBP16.27■□□□□ 0.19
ATG4B-205ENST00000404914 SLC7A8Q9UHI5 535 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 PLA2G4CQ9UP65 541 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 CHMP2BQ9UQN3 213 aa16.27■□□□□ 0.19
ATG4B-205ENST00000404914 MTO1Q9Y2Z2 717 aaKnown RBP16.27■□□□□ 0.19
ATG4B-205ENST00000404914 NFASCO94856 1347 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 GRIA2P42262 883 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 RAP1GDS1P52306 607 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 MCCD1P59942 119 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-205ENST00000404914 CDC16Q13042 620 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 RASIP1Q5U651 963 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 RNF111Q6ZNA4 994 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 SH2D5Q6ZV89 423 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 RIT2Q99578 217 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 ST6GALNAC4Q9H4F1 302 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 MEI4A8MW99 385 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 CAPN14A8MX76 684 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 TM9SF1O15321 606 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 SORBS2O94875 1100 aaKnown RBP16.26■□□□□ 0.19
ATG4B-205ENST00000404914 QARSP47897 775 aaKnown RBP16.26■□□□□ 0.19
ATG4B-205ENST00000404914 LMNB2Q03252 620 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 LIN9Q5TKA1 542 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 TTLL6Q8N841 843 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 ATP11CQ8NB49 1132 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms