RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 AQP5P55064 265 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CDK16Q00536 496 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 DMP1Q13316 513 aaPredicted RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 SPOCD1Q6ZMY3 1216 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 RGS9BPQ6ZS82 235 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 RAPH1Q70E73 1250 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 ALLCQ8N6M5 410 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 FEZF2Q8TBJ5 459 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 HSPH1Q92598 858 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CEP170P1Q96L14 293 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 EBF4Q9BQW3 602 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 MXRA8Q9BRK3 442 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 COA1Q9GZY4 146 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CYLDQ9NQC7 956 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 PIH1D1Q9NWS0 290 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CCPG1Q9ULG6 757 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 SPATA31A5Q5VU36 1347 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 SPATA31A7Q8IWB4 1347 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 MAGEA13PA6NCF6 341 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 PRR5-ARHGAP8B1AHC4 643 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 RNASEH1O60930 286 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 ZWINTO95229 277 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 INHBAP08476 426 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 SCNN1BP51168 640 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 GPC3P51654 580 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 NLRP11P59045 1033 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 ARHGAP8P85298 464 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CYP24A1Q07973 514 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 NPNTQ6UXI9 565 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 MON1BQ7L1V2 547 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 RSPH3Q86UC2 560 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 TMEM161BQ8NDZ6 487 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CPT1BQ92523 772 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 PRMT6Q96LA8 375 aaPredicted RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 PANX3Q96QZ0 392 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 APOBEC3GQ9HC16 384 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 AK5Q9Y6K8 562 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 LAMB2P55268 1798 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 TRIM49D1C9J1S8 452 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 E7ENQ6 273 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 P4HA2O15460 535 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 LMNAP02545 664 aaKnown RBP10.02□□□□□ -0.8
SMC1B-202ENST00000404354 F7P08709 466 aaPredicted RBP10.02□□□□□ -0.8
SMC1B-202ENST00000404354 DLDP09622 509 aaKnown RBP10.02□□□□□ -0.8
SMC1B-202ENST00000404354 WEE2P0C1S8 567 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 ANPEPP15144 967 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 MSX2P35548 267 aaPredicted RBP10.02□□□□□ -0.8
SMC1B-202ENST00000404354 GTF2BQ00403 316 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 CNPY1Q3B7I2 92 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 RALGPS1Q5JS13 557 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 ZNF276Q8N554 614 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 EXD1Q8NHP7 514 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 AGR3Q8TD06 166 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 APOL6Q9BWW8 343 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 ACSS2Q9NR19 701 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 STK24Q9Y6E0 443 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 TNRC6CQ9HCJ0 1690 aaKnown RBP10.02□□□□□ -0.8
SMC1B-202ENST00000404354 CDK5RAP2Q96SN8 1893 aa10.02□□□□□ -0.8
SMC1B-202ENST00000404354 MYOCOSA0A1B0GUC4 107 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 KBTBD13C9JR72 458 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 H0YIN7 160 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 GTF2H1P32780 548 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 RPL22P35268 128 aaKnown RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 DEUP1Q05D60 604 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 AP1B1Q10567 949 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 MTMR1Q13613 665 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 CHI3L2Q15782 390 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 POLNQ7Z5Q5 900 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 RASSF3Q86WH2 238 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 SCUBE1Q8IWY4 988 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 SMC1BQ8NDV3 1235 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 MTBPQ96DY7 904 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 SENP7Q9BQF6 1050 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 NDE1Q9NXR1 346 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 SLC7A8Q9UHI5 535 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 VIL1P09327 827 aaKnown RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 NOMO3P69849 1222 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 BTKQ06187 659 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 ZNF252P-AS1Q0IIN9 211 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 BST1Q10588 318 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 TRAF1Q13077 416 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 ZRSR2Q15696 482 aaKnown RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 PPP6R3Q5H9R7 873 aaPredicted RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 TDRD10Q5VZ19 366 aaKnown RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 DNAJC24Q6P3W2 148 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 KATNAL2Q8IYT4 538 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 RIBC1Q8N443 379 aaPredicted RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 BANPQ8N9N5 519 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 ATP11CQ8NB49 1132 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 CCDC110Q8TBZ0 833 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 PPP1R36Q96LQ0 422 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 TTC25Q96NG3 672 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 PHF12Q96QT6 1004 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 NDNQ99608 321 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 RANBP17Q9H2T7 1088 aaKnown RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 RAVER2Q9HCJ3 691 aaKnown RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 SAR1AQ9NR31 198 aa10.02□□□□□ -0.81
SMC1B-202ENST00000404354 STX18Q9P2W9 335 aaKnown RBP10.02□□□□□ -0.81
SMC1B-202ENST00000404354 TAF1LQ8IZX4 1826 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms