RNA–Protein interactions for RNA: ENST00000403974.6

PMS2CL-202, Transcript of PMS2 C-terminal like pseudogene, humanhuman

BASIC

Gene PMS2CL, Length 1,529 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-202ENST00000403974 CDH22Q9UJ99 828 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 MAFFQ9ULX9 164 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 USP15Q9Y4E8 981 aaPredicted RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 NME7Q9Y5B8 376 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 INSL5Q9Y5Q6 135 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 A0A1W2PQJ5 194 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 EPHB6O15197 1021 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SOAT2O75908 522 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 VNN2O95498 520 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 HNRNPA1P09651 372 aaKnown RBP eCLIP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ALDH1A3P47895 512 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 MFAP3P55082 362 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 TWF1Q12792 350 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SMARCB1Q12824 385 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 PUS10Q3MIT2 529 aaKnown RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 RRAGAQ7L523 313 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 TMC6Q7Z403 805 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 GPR149Q86SP6 731 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ACOT1Q86TX2 421 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 TTC9BQ8N6N2 239 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SMRP1Q8NCR6 262 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 SPPL2BQ8TCT7 592 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 TNIP3Q96KP6 325 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 RIPOR3Q96MK2 946 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ASB2Q96Q27 587 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 ARID3AQ99856 593 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 NAA15Q9BXJ9 866 aaKnown RBP13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 EDEM3Q9BZQ6 932 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 DNAI2Q9GZS0 605 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 CRISPLD1Q9H336 500 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 CRTAC1Q9NQ79 661 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 HMGXB4Q9UGU5 601 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 FAM50BQ9Y247 325 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 FHOD1Q9Y613 1164 aa13.18□□□□□ -0.3
PMS2CL-202ENST00000403974 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 XYLBO75191 536 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 GYPCP04921 128 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 IL9P15248 144 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 POLR2FP61218 127 aaKnown RBP13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 YWHAEP62258 255 aaKnown RBP13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 MAPRE1Q15691 268 aaKnown RBP13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 IQCEQ6IPM2 695 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 FAM171BQ6P995 826 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 GJB7Q6PEY0 223 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 C4orf50Q6ZRC1 276 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 CACNA2D4Q7Z3S7 1137 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 UNC93AQ86WB7 457 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 ELMOD1Q8N336 334 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 TTC39CQ8N584 583 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 B3GALNT2Q8NCR0 500 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 CMASQ8NFW8 434 aaPredicted RBP13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 MYLPFQ96A32 169 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 KREMEN1Q96MU8 473 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 MED10Q9BTT4 135 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 NT5C1AQ9BXI3 368 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 UBE2TQ9NPD8 197 aaPredicted RBP13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 DNAJC12Q9UKB3 198 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 YIPF1Q9Y548 306 aa13.17□□□□□ -0.3
PMS2CL-202ENST00000403974 CILPO75339 1184 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 TPM1P09493 284 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 CYP2F1P24903 491 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 MTHFRP42898 656 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 EPHB3P54753 998 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 PLD1Q13393 1074 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 RAPGEF1Q13905 1077 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 GRASPQ7Z6J2 395 aaPredicted RBP13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 SCN4BQ8IWT1 228 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 KAT5Q92993 513 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 ZNF707Q96C28 371 aaPredicted RBP13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 PCED1BQ96HM7 432 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 ZNF512Q96ME7 567 aaPredicted RBP13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 PKMYT1Q99640 499 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 RHOBTB2Q9BYZ6 727 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 AJAP1Q9UKB5 411 aaPredicted RBP13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 MYO6Q9UM54 1294 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
PMS2CL-202ENST00000403974 F8VZ95 297 aa13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 CLDN5O00501 218 aa13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 BDNFP23560 247 aa13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 HOXA9P31269 272 aa13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 JAM2P57087 298 aa13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 TBX2Q13207 712 aaPredicted RBP13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 CBX2Q14781 532 aaPredicted RBP13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 TAF12Q16514 161 aa13.15□□□□□ -0.3
PMS2CL-202ENST00000403974 FMNL3Q8IVF7 1028 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms