RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 LLGL2Q6P1M3 1020 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 FEZF2Q8TBJ5 459 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 SLC2A14Q8TDB8 520 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 MYLPFQ96A32 169 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 SPAG5Q96R06 1193 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 NUP58Q9BVL2 599 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 ABI2Q9NYB9 513 aaPredicted RBP16.95■□□□□ 0.3
HMGA1-204ENST00000401473 CAPN11Q9UMQ6 739 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 SOAT2O75908 522 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 GFPT2O94808 682 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 PAEPP09466 180 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 BDNFP23560 247 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 CASP14P31944 242 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 SOX5P35711 763 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 CACNA2D1P54289 1103 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 GSE1Q14687 1217 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 COL19A1Q14993 1142 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 NFE2Q16621 373 aaPredicted RBP16.94■□□□□ 0.3
HMGA1-204ENST00000401473 E4F1Q66K89 784 aaPredicted RBP16.94■□□□□ 0.3
HMGA1-204ENST00000401473 PPFIBP1Q86W92 1011 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 KREMEN2Q8NCW0 462 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 MAFAQ8NHW3 353 aaPredicted RBP16.94■□□□□ 0.3
HMGA1-204ENST00000401473 EDEM3Q9BZQ6 932 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 DAAM1Q9Y4D1 1078 aa16.94■□□□□ 0.3
HMGA1-204ENST00000401473 LRRC53A6NM62 1247 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 BEST1O76090 585 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 CFHP08603 1231 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 BRD2P25440 801 aaKnown RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 SSTR3P32745 418 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 DLX2Q07687 328 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 TBX2Q13207 712 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 MAPRE1Q15691 268 aaKnown RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 CTC1Q2NKJ3 1217 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 CFAP221Q4G0U5 840 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 IRF2BP2Q7Z5L9 587 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 ZNF606Q8WXB4 792 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 PPP2R3CQ969Q6 453 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 CDCA3Q99618 268 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 HNRNPABQ99729 332 aaKnown RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 CYP4F11Q9HBI6 524 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 FBXW11Q9UKB1 542 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 PCDHB5Q9Y5E4 795 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 A0A1W2PQJ5 194 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 VDRP11473 427 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 CD19P15391 556 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 LTBRP36941 435 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 STAT1P42224 750 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 ARID5AQ03989 594 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 GOLGA8FQ08AF8 430 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 GOLGA8DPQ0D2H9 430 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 SMARCB1Q12824 385 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 ADAM15Q13444 863 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 SPATA2LQ8IUW3 424 aaPredicted RBP16.93■□□□□ 0.3
HMGA1-204ENST00000401473 TCEAL8Q8IYN2 117 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 EFHBQ8N7U6 833 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 KCNK16Q96T55 309 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 KIAA1257Q9ULG3 409 aa16.93■□□□□ 0.3
HMGA1-204ENST00000401473 O00370 1275 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 RFPL2O75678 378 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 C1RP00736 705 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 GNA15P30679 374 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 SGO2Q562F6 1265 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 ARHGAP17Q68EM7 881 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 TMEM184AQ6ZMB5 413 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 C4orf50Q6ZRC1 276 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 SPPL2BQ8TCT7 592 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
HMGA1-204ENST00000401473 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.3
HMGA1-204ENST00000401473 MAN1C1Q9NR34 630 aa16.92■□□□□ 0.3
HMGA1-204ENST00000401473 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
HMGA1-204ENST00000401473 CYP11B1P15538 503 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 ADORA2BP29275 332 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 GPR15P49685 360 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 ZBED6P86452 979 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 PTK2Q05397 1052 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 CNGA2Q16280 664 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 DDR2Q16832 855 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 FAM35AQ86V20 835 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 TTC30AQ86WT1 665 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 SLC7A14Q8TBB6 771 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 C2orf15Q8WU43 125 aaKnown RBP16.91■□□□□ 0.3
HMGA1-204ENST00000401473 PLEKHA4Q9H4M7 779 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 ABCB6Q9NP58 842 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 AIPL1Q9NZN9 384 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 CLEC1BQ9P126 229 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 TSPAN16Q9UKR8 245 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 MYO6Q9UM54 1294 aa16.91■□□□□ 0.3
HMGA1-204ENST00000401473 TBX10O75333 385 aa16.9■□□□□ 0.3
HMGA1-204ENST00000401473 C8AP07357 584 aa16.9■□□□□ 0.3
HMGA1-204ENST00000401473 HAPLN1P10915 354 aaPredicted RBP16.9■□□□□ 0.3
HMGA1-204ENST00000401473 ELF1P32519 619 aa16.9■□□□□ 0.3
HMGA1-204ENST00000401473 KRT9P35527 623 aa16.9■□□□□ 0.3
HMGA1-204ENST00000401473 ADKP55263 362 aaKnown RBP16.9■□□□□ 0.3
HMGA1-204ENST00000401473 MGAT5BQ3V5L5 792 aa16.9■□□□□ 0.3
HMGA1-204ENST00000401473 PKDCCQ504Y2 493 aa16.9■□□□□ 0.3
HMGA1-204ENST00000401473 SMYD5Q6GMV2 418 aa16.9■□□□□ 0.3
HMGA1-204ENST00000401473 NOP9Q86U38 636 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms