RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 AURKCQ9UQB9 309 aa3.4□□□□□ -1.86
KNL1-202ENST00000399668 LAMB2P55268 1798 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ATRXP46100 2492 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 DOCK1Q14185 1865 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 A0A087X0B3 334 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 F8VZ95 297 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 NDUFS3O75489 264 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 PPP1R37O75864 691 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TARSP26639 723 aaKnown RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 PGM1P36871 562 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 THPOP40225 353 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ALDH1A3P47895 512 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 CPT1AP50416 773 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ARFIP2P53365 341 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 CUL2Q13617 745 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 GRIK5Q16478 980 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 THEMIS2Q5TEJ8 643 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 PPP4R4Q6NUP7 873 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 SYDE1Q6ZW31 735 aaPredicted RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 ZNF720Q7Z2F6 126 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ANKRD13AQ8IZ07 590 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 NUP93Q8N1F7 819 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 KIF2BQ8N4N8 673 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ATPAF2Q8N5M1 289 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 USP38Q8NB14 1042 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 RIT2Q99578 217 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 RIOX1Q9H6W3 641 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 IL1RL2Q9HB29 575 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ANKEF1Q9NU02 776 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 MID2Q9UJV3 735 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 FARP1Q9Y4F1 1045 aaPredicted RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 RNF103-CHMP3A0A140T963 221 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 PRR23AA6NEV1 266 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 WNT10BO00744 389 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 CHUKO15111 745 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TFRCP02786 760 aaKnown RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 ETFBP38117 255 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 HADHAP40939 763 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 IRAK1P51617 712 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 HERVK_113P62684 666 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 PTK7Q13308 1070 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 LAMC2Q13753 1193 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TBCCQ15814 346 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 SGO1Q5FBB7 561 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ILDR1Q86SU0 546 aaPredicted RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 PRPF39Q86UA1 669 aaKnown RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 GLIS3Q8NEA6 775 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ABTB1Q969K4 478 aaPredicted RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 OPTNQ96CV9 577 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ZNF560Q96MR9 790 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 EML4Q9HC35 981 aaKnown RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 USP15Q9Y4E8 981 aaPredicted RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 ARAP2Q8WZ64 1704 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 M0QYT0 321 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 AIM2O14862 343 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TRAPPC3O43617 180 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 CELF2O95319 508 aaKnown RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 ESRRBO95718 433 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 PYGBP11216 843 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ITGA4P13612 1032 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ITIH2P19823 946 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 EEF1DP29692 281 aaKnown RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 AVPR1AP37288 418 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 NAMPTP43490 491 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 MAPK7Q13164 816 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TTC39BQ5VTQ0 682 aaPredicted RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 OTOP1Q7RTM1 612 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 DDX53Q86TM3 631 aaKnown RBP3.4□□□□□ -1.87
KNL1-202ENST00000399668 PARP9Q8IXQ6 854 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TRIML2Q8N7C3 387 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 ZSWIM2Q8NEG5 633 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 RUBCNQ92622 972 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 FUCA2Q9BTY2 467 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TASP1Q9H6P5 420 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 SFMBT1Q9UHJ3 866 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 KCNH4Q9UQ05 1017 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 PCDHAC2Q9Y5I4 1007 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 SALL3Q9BXA9 1300 aa3.4□□□□□ -1.87
KNL1-202ENST00000399668 TAF1LQ8IZX4 1826 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 ZSCAN5CA6NGD5 496 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 CASTOR2A6NHX0 329 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 C3orf70A6NLC5 250 aaPredicted RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 FAM86B1E9PN63 330 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SPTLC1O15269 473 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 FAM86B2P0C5J1 330 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 AP3M2P53677 418 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 MAP3K7CLP57077 242 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 HSP90AA5PQ58FG0 334 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 JAMLQ86YT9 394 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SCUBE3Q8IX30 993 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SLC25A41Q8N5S1 370 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 C1orf131Q8NDD1 294 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 PPP1R13LQ8WUF5 828 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 SCG3Q8WXD2 468 aaKnown RBP3.39□□□□□ -1.87
KNL1-202ENST00000399668 CASKIN2Q8WXE0 1202 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 KAT2BQ92831 832 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 TATDN2Q93075 761 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 GRAMD1AQ96CP6 724 aa3.39□□□□□ -1.87
KNL1-202ENST00000399668 GMCL1Q96IK5 515 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms