RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZNF444Q8N0Y2 327 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 PSMB7Q99436 277 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 YIPF2Q9BWQ6 316 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 BMP2KQ9NSY1 1161 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 ZNF446Q9NWS9 450 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 KIF17Q9P2E2 1029 aa6.6□□□□□ -1.35
TRAPPC13-202ENST00000399438 A0A0G2JPF8 293 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 KRT87PA6NCN2 255 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 HNRNPCL3B7ZW38 293 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 PRPSAP2O60256 369 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 HNRNPCL4P0DMR1 293 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 PABPC1P11940 636 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 FCER1AP12319 257 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 SOX6P35712 828 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 STAT6P42226 847 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 HNMTP50135 292 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 PPP5CP53041 499 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 RPS26P62854 115 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ACTN3Q08043 901 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 TRIP4Q15650 581 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ADIPOQQ15848 244 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 SKIDA1Q1XH10 827 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 PIWIL3Q7Z3Z3 882 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ZFPM1Q8IX07 1006 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 SYTL1Q8IYJ3 562 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ZSCAN1Q8NBB4 408 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 CCDC150Q8NCX0 1101 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 CCDC12Q8WUD4 166 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ANKRD7Q92527 254 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 TMEM169Q96HH4 297 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 TMEM47Q9BQJ4 181 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 RNF26Q9BY78 433 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ACPTQ9BZG2 426 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 SUGCTQ9HAC7 445 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 LATS2Q9NRM7 1088 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 UBAP1Q9NZ09 502 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 TNRC6CQ9HCJ0 1690 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 RHPN2P1A8MT19 583 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 H3BML4 177 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 SGK1O00141 431 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 DDX3XO00571 662 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 CEP104O60308 925 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 CCNT1O60563 726 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ULK1O75385 1050 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ATE1O95260 518 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 SLU7O95391 586 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 CAVIN2O95810 425 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 TSHRP16473 764 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 TXKP42681 527 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 NAPAP54920 295 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 PMS2P11Q13670 270 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 COG2Q14746 738 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 LASP1Q14847 261 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 KRT71Q3SY84 523 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 LRCH2Q5VUJ6 765 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 UNC5AQ6ZN44 842 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 DENND5BQ6ZUT9 1274 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 MTDHQ86UE4 582 aaKnown RBP6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 PACS2Q86VP3 889 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 REXO1L1PQ8IX06 675 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 KCTD6Q8NC69 237 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 NELFBQ8WX92 580 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 WNK4Q96J92 1243 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ADAM19Q9H013 955 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 KRT84Q9NSB2 600 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 RTL9Q8NET4 1388 aa6.59□□□□□ -1.35
TRAPPC13-202ENST00000399438 ARHGAP10A1A4S6 786 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 MEIS3P2A8K0S8 358 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 KLRF2D3W0D1 207 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 ASAP2O43150 1006 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 UBXN7O94888 489 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 HEXBP07686 556 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 NOS3P29474 1203 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 CD83Q01151 205 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 DDR1Q08345 913 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 FOXO1Q12778 655 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 BFSP1Q12934 665 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 ACVR2BQ13705 512 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 ALG11Q2TAA5 492 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 FLYWCH1Q4VC44 716 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 METTL11BQ5VVY1 283 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 SPECC1LQ69YQ0 1117 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 PRR5LQ6MZQ0 368 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 TRIM65Q6PJ69 517 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 KCTD1Q719H9 257 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 DNAAF5Q86Y56 855 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 TMEM139Q8IV31 216 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 SLC7A5P1Q8MH63 180 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 JADE3Q92613 823 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 EXOC4Q96A65 974 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZUFSPQ96AP4 578 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 CHP1Q99653 195 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 NYXQ9GZU5 481 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 PDE11AQ9HCR9 933 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 POLLQ9UGP5 575 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 EXOC7Q9UPT5 735 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 SESN1Q9Y6P5 492 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 MYH3P11055 1940 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms