RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 OTOAQ7RTW8 1153 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 SLC13A5Q86YT5 568 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 NSL1Q96IY1 281 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 PPP1R16BQ96T49 567 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 PARK7Q99497 189 aaKnown RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 CCDC77Q9BR77 488 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 EHMT1Q9H9B1 1298 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 GCNT4Q9P109 453 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 DNM3Q9UQ16 869 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 ZSWIM8A7E2V4 1837 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 A0A0J9YVX5 310 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 ANKRD62A6NC57 917 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 A8MXQ7 604 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 RNASEH1O60930 286 aaKnown RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 HAUS5O94927 633 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 PYGMP11217 842 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 SOX5P35711 763 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 CD151P48509 253 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 ACTR2P61160 394 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 KRT17Q04695 432 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 PPP2R5CQ13362 524 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 HERC4Q5GLZ8 1057 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 OLFML2BQ68BL8 750 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 RNF168Q8IYW5 571 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 C12orf50Q8NA57 414 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 ZNF398Q8TD17 642 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 TRAPPC12Q8WVT3 735 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 MAML1Q92585 1016 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 PPP2R3CQ969Q6 453 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 FNBP1Q96RU3 617 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 JPH1Q9HDC5 661 aaPredicted RBP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 NPHS2Q9NP85 383 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 EURLQ9NYK6 297 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 TAS2R14Q9NYV8 317 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 ASIC3Q9UHC3 531 aa10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGCLL1-205ENST00000398661 DNAJC25-GNG10A0A024R161 153 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 CFAP69A5D8W1 941 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TISP43B9A030 160 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 PRPF4O43172 522 aaKnown RBP eCLIP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 CRABP2P29373 138 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 SERPINB3P29508 390 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 HADHBP55084 474 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 GHRHRQ02643 423 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TRIM32Q13049 653 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 CBX3Q13185 183 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 MPP3Q13368 585 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 STAT4Q14765 748 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 P3H1Q32P28 736 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 CFAP157Q5JU67 520 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TCERG1LQ5VWI1 586 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 FYB2Q5VWT5 728 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 B3GNT9Q6UX72 402 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 PRUNE1Q86TP1 453 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 RHOT2Q8IXI1 618 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 PPP1R14BQ96C90 147 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 NMD3Q96D46 503 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 SNF8Q96H20 258 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 CAPNS2Q96L46 248 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 SYT11Q9BT88 431 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 YIPF2Q9BWQ6 316 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 ZMYM2Q9UBW7 1377 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TMEM221A6NGB7 291 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TBX3O15119 743 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 OPHN1O60890 802 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 GJB1P08034 283 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TXNP10599 105 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 ANPEPP15144 967 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TNFAIP3P21580 790 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 AMPD1P23109 780 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 NMT1P30419 496 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 ITGA8P53708 1063 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 SULT2A1Q06520 285 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TMEM259Q4ZIN3 620 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 RINT1Q6NUQ1 792 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 ANO5Q75V66 913 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 TRABD2AQ86V40 505 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 ZBTB8BQ8NAP8 495 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 CATSPER2Q96P56 530 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 IQCGQ9H095 443 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 SEPT11Q9NVA2 429 aaKnown RBP10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 KANSL3Q9P2N6 904 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 GABRQQ9UN88 632 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 FRMPD4Q14CM0 1322 aa10.63□□□□□ -0.71
HMGCLL1-205ENST00000398661 SMIM31A0A1B0GVY4 71 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 SPATA31C2B4DYI2 1134 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 SLC25A27O95847 323 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 SNAI1O95863 264 aaPredicted RBP10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 COMTP21964 271 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 CETN2P41208 172 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 GRIA2P42262 883 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 SLC18A1P54219 525 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 NR1H3Q13133 447 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 PLEKHG4Q58EX7 1191 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 KLC3Q6P597 504 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 SFR1Q86XK3 245 aa10.62□□□□□ -0.71
HMGCLL1-205ENST00000398661 SLCO2A1Q92959 643 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms