RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 BRCC3P46736 316 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 SGO2Q562F6 1265 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 NAA35Q5VZE5 725 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 CPA5Q8WXQ8 436 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.46■□□□□ 0.874e-7■■■■■ 58.1
PDLIM2-204ENST00000397760 MRPL9Q9BYD2 267 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 TSPYL1Q9H0U9 437 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 NRDE2Q9H7Z3 1164 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 IL23AQ9NPF7 189 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 STXBP5LQ9Y2K9 1186 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 GOLGA6BA6NDN3 693 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 F8W810 466 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 HCRTO43612 131 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 EFCAB14O75071 495 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 AMHP03971 560 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 ITGB1P05556 798 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 TMEM253P0C7T8 217 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 NAP1L1P55209 391 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 C8orf74Q6P047 294 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 OSTM1Q86WC4 334 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 TMEM86AQ8N2M4 240 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 EIF1ADQ8N9N8 165 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 CTNNBL1Q8WYA6 563 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 THAP2Q9H0W7 228 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 DPEP3Q9H4B8 488 aa20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 TIMM13Q9Y5L4 95 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-204ENST00000397760 TTC3P53804 2025 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 I3L4J1 428 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 OPA1O60313 960 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 ODC1P11926 461 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 NOMO3P69849 1222 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 CNGA2Q16280 664 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 IFT20Q8IY31 132 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 C7orf61Q8IZ16 206 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 CRYBG2Q8N1P7 616 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 C12orf29Q8N999 325 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 TOP1MTQ969P6 601 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 DNAI2Q9GZS0 605 aa20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 DMGDHQ9UI17 866 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 PRG3Q9Y2Y8 225 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-204ENST00000397760 A6NNZ2 444 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 GOLGA8KD6RF30 607 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 TMEM189-UBE2V1I3L0A0 370 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 M0QZQ0 153 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 AGPSO00116 658 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 GABRDO14764 452 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 PALMO75781 387 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 LSM8O95777 96 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 NSFP46459 744 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 CENPCQ03188 943 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 TUBB8Q3ZCM7 444 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 BADQ92934 168 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 SH3GL2Q99962 352 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 CEP83Q9Y592 693 aa20.44■□□□□ 0.86
PDLIM2-204ENST00000397760 O00370 1275 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 NRP1O14786 923 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 BUB1O43683 1085 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 ZMYND10O75800 440 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 DGKIO75912 1065 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 ALDH2P05091 517 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 GGCXP38435 758 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 LHX1P48742 406 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 WDR5P61964 334 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 DEFB103AP81534 67 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 PPIGQ13427 754 aaKnown RBP eCLIP20.43■□□□□ 0.861e-8■■■□□ 18.4
PDLIM2-204ENST00000397760 DENND1BQ6P3S1 775 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 TMEM35BQ8NCS4 154 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 TNIP3Q96KP6 325 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 SUSD3Q96L08 255 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 ZNF518BQ9C0D4 1074 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 LHX5Q9H2C1 402 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 GDF3Q9NR23 364 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 HCSTQ9UBK5 93 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 TDRD15B5MCY1 1934 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 MICAL2O94851 1124 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 GPC5P78333 572 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 STILQ15468 1287 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 OTOP2Q7RTS6 562 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 METTL23Q86XA0 190 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 LRRC43Q8N309 656 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 ARHGEF26Q96DR7 871 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 FAM49BQ9NUQ9 324 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 DDX43Q9NXZ2 648 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 DSEQ9UL01 958 aa20.43■□□□□ 0.86
PDLIM2-204ENST00000397760 A0A0A6YYK5 440 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 ARHGEF37A1IGU5 675 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 NCK2O43639 380 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 TADA2AO75478 443 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 CYP11A1P05108 521 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 CDH5P33151 784 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 SLC11A1P49279 550 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 FPGSQ05932 587 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 PPP1R26Q5T8A7 1209 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 PPP1R2P3Q6NXS1 205 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 LCLAT1Q6UWP7 414 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 SND1Q7KZF4 910 aaKnown RBP eCLIP20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 C16orf59Q7L2K0 433 aa20.42■□□□□ 0.86
PDLIM2-204ENST00000397760 MCOLN2Q8IZK6 566 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms