RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NEU2Q9Y3R4 380 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 PCDHB4Q9Y5E5 795 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 CHD5Q8TDI0 1954 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 EBAG9O00559 213 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 PITPNM1O00562 1244 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 STAG3L1P0CL83 205 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SKIV2L2P42285 1042 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 BST2Q10589 180 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SIX4Q9UIU6 781 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 C5orf60A6NFR6 353 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 GABRDO14764 452 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 ALOX15BO15296 676 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 EFCAB14O75071 495 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 PFKLP17858 780 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 HLTFQ14527 1009 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 DENND2CQ68D51 928 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 ADAMTS10Q9H324 1103 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 EPB41L5Q9HCM4 733 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 ADM5C9JUS6 153 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 KLK7P49862 253 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 GPR162Q16538 588 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 DPYSL2Q16555 572 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 TACO1Q9BSH4 297 aaKnown RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 SUGCTQ9HAC7 445 aa6.17□□□□□ -1.42
PTPRD-206ENST00000397617 COL4A4P53420 1690 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-206ENST00000397617 BCLAF3A2AJT9 711 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 VNN1O95497 513 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ARHGAP44Q17R89 818 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 STXBP5Q5T5C0 1151 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ALKAL1Q6UXT8 129 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 RPUSD2Q8IZ73 545 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ANKRD13CQ8N6S4 541 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ATP11CQ8NB49 1132 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 TMEM143Q96AN5 459 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 SAAL1Q96ER3 474 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ANKRD27Q96NW4 1050 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 NSRP1Q9H0G5 558 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ZBTB39O15060 712 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 TSPAN1O60635 241 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 WARSP23381 471 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 FCGRTP55899 365 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 UBXN2AP68543 259 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 VPS45Q9NRW7 570 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 NUB1Q9Y5A7 615 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 SFI1A8K8P3 1242 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 TRDMT1O14717 391 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 OAS2P29728 719 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 PSEN2P49810 448 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 TFAMQ00059 246 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 FSTL1Q12841 308 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 PDCLQ13371 301 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 Q3C1V9 767 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 C1orf53Q5VUE5 145 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 KAT2BQ92831 832 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 MTBPQ96DY7 904 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CDK5RAP1Q96SZ6 601 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 GJD2Q9UKL4 321 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ENC1O14682 589 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 IVDP26440 423 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 MAGEA11P43364 429 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 KLHL38Q2WGJ6 581 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 NUGGCQ68CJ6 796 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 TLK2Q86UE8 772 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ZMYND15Q9H091 742 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ACSS3Q9H6R3 686 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 POLIQ9UNA4 740 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 C2CD4BA6NLJ0 364 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 DDX39AO00148 427 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 HUNKP57058 714 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 BRMS1LQ5PSV4 323 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 SAPCD2Q86UD0 394 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CDKL3Q8IVW4 592 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ZNF516Q92618 1163 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 PCDHB18PQ96TA0 734 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 DDX23Q9BUQ8 820 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 RAD51CO43502 376 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 HUS1O60921 280 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 GSTA1P08263 222 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 SLURP2P0DP57 97 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 NLRP11P59045 1033 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ARID5AQ03989 594 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CCDC105Q8IYK2 499 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ZSWIM2Q8NEG5 633 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 PTCD2Q8WV60 388 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 RNPEPQ9H4A4 650 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CSNK1G1Q9HCP0 422 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 MID2Q9UJV3 735 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ZNF180Q9UJW8 692 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 RNF40O75150 1001 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 LRCH4O75427 683 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 TPSB2P20231 275 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 SIX1Q15475 284 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 TPSAB1Q15661 275 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CENPUQ71F23 418 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 ARRDC4Q8NCT1 418 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 FBXO25Q8TCJ0 367 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CLMNQ96JQ2 1002 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 MRPL9Q9BYD2 267 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CELF4Q9BZC1 486 aaKnown RBP6.16□□□□□ -1.42
PTPRD-206ENST00000397617 CLIC5Q9NZA1 410 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms