RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CNOT8Q9UFF9 292 aaKnown RBP29.12■■■□□ 2.25
CPNE1-203ENST00000397442 DNAI1Q9UI46 699 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 MRPL42Q9Y6G3 142 aaKnown RBP29.12■■■□□ 2.25
CPNE1-203ENST00000397442 SF3B1O75533 1304 aaKnown RBP eCLIP29.11■■■□□ 2.252e-6■■■■■ 85.9
CPNE1-203ENST00000397442 MYBL1P10243 752 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 ADORA2BP29275 332 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 HTRA4P83105 476 aaPredicted RBP29.11■■■□□ 2.25
CPNE1-203ENST00000397442 FAM171A1Q5VUB5 890 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 LLGL2Q6P1M3 1020 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 ANKRD52Q8NB46 1076 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 TRIM11Q96F44 468 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 CPXM1Q96SM3 734 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 AVENQ9NQS1 362 aaPredicted RBP29.11■■■□□ 2.25
CPNE1-203ENST00000397442 PCDHGC5Q9Y5F6 944 aa29.11■■■□□ 2.25
CPNE1-203ENST00000397442 FGFR3P22607 806 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 PDCLQ13371 301 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 INTS6LQ5JSJ4 861 aaKnown RBP29.1■■■□□ 2.25
CPNE1-203ENST00000397442 FAM171BQ6P995 826 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 ERICH1Q86X53 443 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 RHOT2Q8IXI1 618 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 MYCBPAPQ8TBZ2 947 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 SLC35F5Q8WV83 523 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 DPF3Q92784 378 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 TMEM209Q96SK2 561 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 YME1L1Q96TA2 773 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 B3GNT5Q9BYG0 378 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 HESX1Q9UBX0 185 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 TJP2Q9UDY2 1190 aa29.1■■■□□ 2.25
CPNE1-203ENST00000397442 TULP2O00295 520 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 HADHBP55084 474 aaKnown RBP29.09■■■□□ 2.25
CPNE1-203ENST00000397442 MRPL58Q14197 206 aaKnown RBP29.09■■■□□ 2.25
CPNE1-203ENST00000397442 KCNT2Q6UVM3 1135 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 THEM5Q8N1Q8 247 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 TRIM58Q8NG06 486 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 TPCN2Q8NHX9 752 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 PCED1BQ96HM7 432 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 B3GALT6Q96L58 329 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 CCDC85CA6NKD9 419 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 CLDN5O00501 218 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 MTA2O94776 668 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 NOP2P46087 812 aaKnown RBP29.09■■■□□ 2.25
CPNE1-203ENST00000397442 NAP1L1P55209 391 aaKnown RBP29.09■■■□□ 2.25
CPNE1-203ENST00000397442 PDE4CQ08493 712 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 ELAVL2Q12926 359 aaKnown RBP29.09■■■□□ 2.25
CPNE1-203ENST00000397442 DNTTIP2Q5QJE6 756 aaKnown RBP29.09■■■□□ 2.25
CPNE1-203ENST00000397442 VARS2Q5ST30 1063 aaKnown RBP29.09■■■□□ 2.25
CPNE1-203ENST00000397442 LRRTM3Q86VH5 581 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 IGSF21Q96ID5 467 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 VN1R3Q9BXE9 311 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 CTTNBP2NLQ9P2B4 639 aa29.09■■■□□ 2.25
CPNE1-203ENST00000397442 KIAA1671Q9BY89 1806 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 GRID2IPA4D2P6 1211 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 CALB1P05937 261 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 BCAT1P54687 386 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 PLCB3Q01970 1234 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 TAS1R1Q7RTX1 841 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 PHLDB2Q86SQ0 1253 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 RNF168Q8IYW5 571 aaPredicted RBP29.08■■■□□ 2.25
CPNE1-203ENST00000397442 NUP85Q9BW27 656 aa29.08■■■□□ 2.25
CPNE1-203ENST00000397442 TCRBV5S1A1TA0A578 114 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 SETSIPP0DME0 302 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 CDR1P51861 262 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 BST2Q10589 180 aaKnown RBP29.07■■■□□ 2.24
CPNE1-203ENST00000397442 PLEKHA7Q6IQ23 1121 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 PMF1Q6P1K2 205 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.07■■■□□ 2.24
CPNE1-203ENST00000397442 LRRC57Q8N9N7 239 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 ZNF592Q92610 1267 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 LBHD1Q9BQE6 289 aaPredicted RBP29.07■■■□□ 2.24
CPNE1-203ENST00000397442 TMLHEQ9NVH6 421 aa29.07■■■□□ 2.24
CPNE1-203ENST00000397442 PALMO75781 387 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 ERBB2P04626 1255 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 GABRB2P47870 512 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 CYP4A22Q5TCH4 519 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 LIN9Q5TKA1 542 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 CEP57Q86XR8 500 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 SLC39A11Q8N1S5 342 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 COLGALT1Q8NBJ5 622 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 STK32AQ8WU08 396 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 ZNF558Q96NG5 402 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 UVRAGQ9P2Y5 699 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 NLRC5Q86WI3 1866 aa29.06■■■□□ 2.24
CPNE1-203ENST00000397442 GABBR2O75899 941 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 LINC00271P0C7V0 271 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 LAG3P18627 525 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 MAMLD1Q13495 774 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 IFI16Q16666 785 aaKnown RBP29.05■■■□□ 2.24
CPNE1-203ENST00000397442 RTP2Q5QGT7 225 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 SPOUT1Q5T280 376 aaKnown RBP29.05■■■□□ 2.24
CPNE1-203ENST00000397442 MYLPFQ96A32 169 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 ALS2CR12Q96Q35 445 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 SLC4A5Q9BY07 1137 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 DUSP16Q9BY84 665 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 SLC4A7Q9Y6M7 1214 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 RASIP1Q5U651 963 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 FAM35AQ86V20 835 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 HERC6Q8IVU3 1022 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 KIF18AQ8NI77 898 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 ZNF564Q8TBZ8 553 aaPredicted RBP29.05■■■□□ 2.24
CPNE1-203ENST00000397442 C18orf8Q96DM3 657 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms