RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 MTMR11A4FU01 709 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 MED7O43513 233 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 ADORA2BP29275 332 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 SMARCB1Q12824 385 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 TPGS2Q68CL5 300 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 ADGRD2Q7Z7M1 963 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 NOP9Q86U38 636 aaKnown RBP25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 TC2NQ8N9U0 490 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 ZNF461Q8TAF7 563 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 EPS8L1Q8TE68 723 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 ZNF606Q8WXB4 792 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 ZSWIM1Q9BR11 485 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 ABI2Q9NYB9 513 aaPredicted RBP25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 AFF4Q9UHB7 1163 aaKnown RBP25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 PCDHB5Q9Y5E4 795 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 COL6A3P12111 3177 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 ATP8B3O60423 1300 aa25.05■■□□□ 1.6
TSPAN4-203ENST00000397397 CLDN5O00501 218 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 CLASP2O75122 1294 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 ABLIM3O94929 683 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 FOSL2P15408 326 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 ARID5BQ14865 1188 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 STILQ15468 1287 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 TAF3Q5VWG9 929 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 RBM23Q86U06 439 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 FUKQ8N0W3 1084 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 HNRNPABQ99729 332 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 TLE6Q9H808 572 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 ZNHIT6Q9NWK9 470 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 LMCD1Q9NZU5 365 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 PLXNA3P51805 1871 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 MYO7AQ13402 2215 aa25.04■■□□□ 1.6
TSPAN4-203ENST00000397397 O00370 1275 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 PER2O15055 1255 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 SKILP12757 684 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 HNRNPH3P31942 346 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 SSTR3P32745 418 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 ADCY1Q08828 1119 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 KLHL30Q0D2K2 578 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 CNGA2Q16280 664 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 GOLGA7BQ2TAP0 167 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 FAM35AQ86V20 835 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 ATAD1Q8NBU5 361 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 SPPL2BQ8TCT7 592 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 C2orf15Q8WU43 125 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 SLC20A1Q8WUM9 679 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 PPP2R3CQ969Q6 453 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 ZNF518BQ9C0D4 1074 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 TSPAN16Q9UKR8 245 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 PTPRDP23468 1912 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 TGM5O43548 720 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 VNN2O95498 520 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 BDNFP23560 247 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 PRKCIP41743 596 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 NRIP1P48552 1158 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 ADGRE1Q14246 886 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 PAQR9Q6ZVX9 377 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 FUBP3Q96I24 572 aaKnown RBP eCLIP25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 RHOBTB2Q9BYZ6 727 aa25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 NSUN3Q9H649 340 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 NOCTQ9UK39 431 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.03■■□□□ 1.6
TSPAN4-203ENST00000397397 MICAL2O94851 1124 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 GLUD1P00367 558 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 SERPING1P05155 500 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 SPATA31D3P0C874 917 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 ATF2P15336 505 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 CYP2F1P24903 491 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 ELF1P32519 619 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 DUSP4Q13115 394 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 DUSP6Q16828 381 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 TDRD12Q587J7 1177 aaKnown RBP25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 LILRA6Q6PI73 481 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 LCLAT1Q6UWP7 414 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 SPATA31D4Q6ZUB0 917 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 ZNF677Q86XU0 584 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 DDX1Q92499 740 aaKnown RBP25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 PDCL3Q9H2J4 239 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 HAUS4Q9H6D7 363 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 ABCB6Q9NP58 842 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 HESX1Q9UBX0 185 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 SLC27A5Q9Y2P5 690 aa25.02■■□□□ 1.6
TSPAN4-203ENST00000397397 MYH10P35580 1976 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 MMEP08473 750 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 FAM200BP0CF97 657 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 CLCN4P51793 760 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 GSDMDP57764 484 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 CDR2Q01850 454 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 CFAP221Q4G0U5 840 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 HGSNATQ68CP4 663 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 WDR59Q6PJI9 974 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 TTC9BQ8N6N2 239 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 SMARCD1Q96GM5 515 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 PANX2Q96RD6 677 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 GAS2L1Q99501 681 aaPredicted RBP25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 AGPAT1Q99943 283 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 CYP4F11Q9HBI6 524 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 KRT82Q9NSB4 513 aa25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 BZW2Q9Y6E2 419 aaKnown RBP25.01■■□□□ 1.59
TSPAN4-203ENST00000397397 M0QYV0 167 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms