RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PSMC4P43686 418 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 GPX6P59796 221 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 CYP24A1Q07973 514 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 RNASEH2BQ5TBB1 312 aaKnown RBP9.62□□□□□ -0.87
CAPN3-206ENST00000397163 PLA2G4FQ68DD2 849 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 C3orf62Q6ZUJ4 267 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF677Q86XU0 584 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 ACSF2Q96CM8 615 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-206ENST00000397163 DTNBP1Q96EV8 351 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 TMEM121Q9BTD3 319 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 ST6GALNAC4Q9H4F1 302 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 CLIC5Q9NZA1 410 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 TCEAL9Q9UHQ7 104 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 SHOC2Q9UQ13 582 aa9.62□□□□□ -0.87
CAPN3-206ENST00000397163 MTO1Q9Y2Z2 717 aaKnown RBP9.62□□□□□ -0.87
CAPN3-206ENST00000397163 C2orf71A6NGG8 1288 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 OPHN1O60890 802 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 SUPT3HO75486 399 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TCF4P15884 667 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 GLRA2P23416 452 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 PGM1P36871 562 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 NCKAP1LP55160 1127 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 CDK16Q00536 496 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 AP1B1Q10567 949 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 DMP1Q13316 513 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ZYXQ15942 572 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 BRDTQ58F21 947 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 IZUMO2Q6UXV1 221 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 PALM2Q8IXS6 379 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ATP11CQ8NB49 1132 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ACER1Q8TDN7 264 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 GATA6Q92908 595 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TTC17Q96AE7 1141 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 HIC2Q96JB3 615 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 FAM161BQ96MY7 647 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 SLITRK1Q96PX8 696 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 FAM213AQ9BRX8 229 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 VPS11Q9H270 941 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 DBNDD1Q9H9R9 158 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 SSU72Q9NP77 194 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 KMT5AQ9NQR1 393 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TAS2R1Q9NYW7 299 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 STX18Q9P2W9 335 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 RABGEF1Q9UJ41 708 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 PCDHB4Q9Y5E5 795 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 SCINQ9Y6U3 715 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 CLUHO75153 1309 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 GREB1LQ9C091 1923 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TM9SF1O15321 606 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 LPXNO60711 386 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 MT-ND3P03897 115 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 DESP17661 470 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 AMPD1P23109 780 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 GTF2H1P32780 548 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 NPTX2P47972 431 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 VCPP55072 806 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 MTA1Q13330 715 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 RASA2Q15283 850 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 SPOPLQ6IQ16 392 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TTC7BQ86TV6 843 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 RHPN2Q8IUC4 686 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ARHGAP24Q8N264 748 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TMEM161BQ8NDZ6 487 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 FEZF2Q8TBJ5 459 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 MPP4Q96JB8 637 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 MFSD14AQ96MC6 490 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 KRT82Q9NSB4 513 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ARMCX1Q9P291 453 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 SMCHD1A6NHR9 2005 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 HNRNPDLO14979 420 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 STK10O94804 968 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 BAG2O95816 211 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TNNI1P19237 187 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ARL4CP56559 192 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 GAD2Q05329 585 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 MPP3Q13368 585 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 KLHL38Q2WGJ6 581 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 MDH1BQ5I0G3 518 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 TMEM270Q6UE05 265 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 MAP4K3Q8IVH8 894 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 CFAP61Q8NHU2 1237 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 AGBL1Q96MI9 1066 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF184Q99676 751 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 IDI2Q9BXS1 227 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 RANBP17Q9H2T7 1088 aaKnown RBP9.61□□□□□ -0.87
CAPN3-206ENST00000397163 PCDH9Q9HC56 1237 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF212Q9UDV6 495 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 IP6K2Q9UHH9 426 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
CAPN3-206ENST00000397163 CCDC160A6NGH7 325 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 FCHO1O14526 889 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 MYL2P10916 166 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 GYS1P13807 737 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 GNA15P30679 374 aa9.6□□□□□ -0.87
CAPN3-206ENST00000397163 RPL7AP62424 266 aaKnown RBP9.6□□□□□ -0.87
CAPN3-206ENST00000397163 DYNLT1P63172 113 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms