RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 DHRS4L1P0CG22 281 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 KCNA2P16389 499 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 RASA2Q15283 850 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 NBPF20Q3BBV1 942 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 HHATQ5VTY9 493 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 ARMC2Q8NEN0 867 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 ACTL9Q8TC94 416 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 ZBTB10Q96DT7 871 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 VCPIP1Q96JH7 1222 aa14.64□□□□□ -0.07
NUP98-204ENST00000397004 TNFSF9P41273 254 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 SP2Q02086 613 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 TFDP3Q5H9I0 405 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 RNF220Q5VTB9 566 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 OR52E8Q6IFG1 317 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 RHPN2Q8IUC4 686 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 JOSD2Q8TAC2 188 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 BICD1Q96G01 975 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 FOXP3Q9BZS1 431 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 POLR3FQ9H1D9 316 aaPredicted RBP14.63□□□□□ -0.07
NUP98-204ENST00000397004 MRPL47Q9HD33 250 aaKnown RBP14.63□□□□□ -0.07
NUP98-204ENST00000397004 CNTN3Q9P232 1028 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 SLC24A2Q9UI40 661 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 WASF2Q9Y6W5 498 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 LRRD1A4D1F6 860 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 AVILO75366 819 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 TJP3O95049 919 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 MARK3P27448 753 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 OTUD4Q01804 1114 aaKnown RBP14.63□□□□□ -0.07
NUP98-204ENST00000397004 SLC25A11Q02978 314 aaKnown RBP14.63□□□□□ -0.07
NUP98-204ENST00000397004 HIF1AQ16665 826 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 RFX8Q6ZV50 586 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 PRPF39Q86UA1 669 aaKnown RBP14.63□□□□□ -0.07
NUP98-204ENST00000397004 TTC25Q96NG3 672 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 SHOC2Q9UQ13 582 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 KAT6AQ92794 2004 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 AMPD1P23109 780 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 RFC1P35251 1148 aaPredicted RBP14.63□□□□□ -0.07
NUP98-204ENST00000397004 LIN9Q5TKA1 542 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 TARS2Q9BW92 718 aaKnown RBP14.63□□□□□ -0.07
NUP98-204ENST00000397004 ACSS3Q9H6R3 686 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 PCDH9Q9HC56 1237 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 IP6K2Q9UHH9 426 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 ASB3Q9Y575 518 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 PCDHA10Q9Y5I2 948 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 ADGRA2Q96PE1 1338 aa14.63□□□□□ -0.07
NUP98-204ENST00000397004 E7ESA3 106 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 JAK3P52333 1124 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 FSTL1Q12841 308 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 RCN1Q15293 331 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 ALYREFQ86V81 257 aaKnown RBP14.62□□□□□ -0.07
NUP98-204ENST00000397004 TREML1Q86YW5 311 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 DTX3LQ8TDB6 740 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 DNAJC9Q8WXX5 260 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 C20orf27Q9GZN8 174 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 MANSC1Q9H8J5 431 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 KRT82Q9NSB4 513 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 AGO2Q9UKV8 859 aaKnown RBP14.62□□□□□ -0.07
NUP98-204ENST00000397004 FAM237BA0A1B0GVD1 139 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 PRKD1Q15139 912 aaPredicted RBP14.62□□□□□ -0.07
NUP98-204ENST00000397004 WDR44Q5JSH3 913 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 ZFYVE27Q5T4F4 411 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 STYK1Q6J9G0 422 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 CENPUQ71F23 418 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 TRIM56Q9BRZ2 755 aaKnown RBP14.62□□□□□ -0.07
NUP98-204ENST00000397004 CYP26B1Q9NR63 512 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 FBXO40Q9UH90 709 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 MGAMO43451 1857 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 E7ENQ6 273 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 FAM189A1O60320 539 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 ACADSP16219 412 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 BGNP21810 368 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 RFC5P40937 340 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 CPA2P48052 419 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 NEK3P51956 506 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 PLCB3Q01970 1234 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 BTBD10Q9BSF8 475 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 MECRQ9BV79 373 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 RBAKQ9NYW8 714 aaPredicted RBP14.62□□□□□ -0.07
NUP98-204ENST00000397004 ANKFY1Q9P2R3 1169 aa14.62□□□□□ -0.07
NUP98-204ENST00000397004 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.62□□□□□ -0.07
NUP98-204ENST00000397004 LRCH4O75427 683 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 ATG7O95352 703 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SP100P23497 879 aaPredicted RBP14.61□□□□□ -0.07
NUP98-204ENST00000397004 SATB1Q01826 763 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 CMPK2Q5EBM0 449 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SPDYAQ5MJ70 313 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SNX30Q5VWJ9 437 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 VSIG10LQ86VR7 867 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 TMEM120AQ9BXJ8 343 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 NMUR2Q9GZQ4 415 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SAR1AQ9NR31 198 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 ZWINTO95229 277 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 PRKCEQ02156 737 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 BAATQ14032 418 aaPredicted RBP14.61□□□□□ -0.07
NUP98-204ENST00000397004 LRRN4Q8WUT4 740 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 RBM41Q96IZ5 413 aaKnown RBP14.61□□□□□ -0.07
NUP98-204ENST00000397004 DCLRE1BQ9H816 532 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 ZWILCHQ9H900 591 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SSU72Q9NP77 194 aaKnown RBP14.61□□□□□ -0.07
NUP98-204ENST00000397004 SENP1Q9P0U3 644 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms