RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PDZD3Q86UT5 571 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 CD302Q8IX05 232 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 THEM5Q8N1Q8 247 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 IGSF22Q8N9C0 903 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 MDGA1Q8NFP4 955 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 SNX29Q8TEQ0 813 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 TMEM206Q9H813 350 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 TMEM74BQ9NUR3 256 aa9.12□□□□□ -0.95
SCFD1-202ENST00000396629 OGTO15294 1046 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 JAK2O60674 1132 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 CDC25AP30304 524 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 OPRD1P41143 372 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 MATR3P43243 847 aaKnown RBP eCLIP9.11□□□□□ -0.951e-6■■■□□ 19
SCFD1-202ENST00000396629 MAPK8P45983 427 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 CDR1P51861 262 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 SMTNP53814 917 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 CRY1Q16526 586 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 TTC38Q5R3I4 469 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 JADE1Q6IE81 842 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 C19orf48Q6RUI8 117 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 TMEM92Q6UXU6 159 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 KCNK18Q7Z418 384 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 METTL23Q86XA0 190 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 CHCHD4Q8N4Q1 142 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 FNBP1Q96RU3 617 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 CCSER1Q9C0I3 900 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 RPF1Q9H9Y2 349 aaKnown RBP9.11□□□□□ -0.95
SCFD1-202ENST00000396629 ABI2Q9NYB9 513 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-202ENST00000396629 MBD1Q9UIS9 605 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-202ENST00000396629 PCDHB5Q9Y5E4 795 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 WNT6Q9Y6F9 365 aa9.11□□□□□ -0.95
SCFD1-202ENST00000396629 ANTXRLA6NF34 631 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 CYB561D2O14569 222 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 ALDH1A2O94788 518 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 NOL4O94818 638 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 USP17L7P0C7H9 530 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 HNRNPLP14866 589 aaKnown RBP eCLIP9.1□□□□□ -0.953e-7■■□□□ 12.7
SCFD1-202ENST00000396629 HOXD12P35452 270 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 GPR15P49685 360 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 FAM193AP78312 1265 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 MRPS21P82921 87 aaKnown RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 SAFBQ15424 915 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 ZNF423Q2M1K9 1284 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 GAB4Q2WGN9 574 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 C2orf27AQ580R0 203 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 DCP1BQ8IZD4 617 aaKnown RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 TRMT2BQ96GJ1 504 aaKnown RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 MYRFLQ96LU7 910 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 TMLHEQ9NVH6 421 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 UXTQ9UBK9 157 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 PILRBQ9UKJ0 227 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 DERAQ9Y315 318 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 GCN1Q92616 2671 aaKnown RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 CACNA1EQ15878 2313 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 PTPRBP23467 1997 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 PIGRP01833 764 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 PTGER3P43115 390 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 TRAPPC10P48553 1259 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 NCKAP1LP55160 1127 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 SEC13P55735 322 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 SCAPQ12770 1279 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 HNRNPDQ14103 355 aaKnown RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 COL28A1Q2UY09 1125 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 WSCD1Q658N2 575 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 TMEFF1Q8IYR6 380 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 CCDC33Q8N5R6 958 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 STKLD1Q8NE28 680 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 RLN3Q8WXF3 142 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 SLC22A12Q96S37 553 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 CYP2S1Q96SQ9 504 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 MMTAG2Q9BU76 263 aaKnown RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 LINC00597Q9H2U6 94 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 FOXP1Q9H334 677 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 GCNT4Q9P109 453 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 CPSF3Q9UKF6 684 aaKnown RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 SLC6A14Q9UN76 642 aa9.1□□□□□ -0.95
SCFD1-202ENST00000396629 MAGED2Q9UNF1 606 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-202ENST00000396629 TRAV19A0A0A6YYK7 116 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 PP2D1A8MPX8 630 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 H0YCG3 227 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 MAP3K13O43283 966 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 PRPF40AO75400 957 aaKnown RBP9.09□□□□□ -0.95
SCFD1-202ENST00000396629 NFATC1O95644 943 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 NFICP08651 508 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 CD59P13987 128 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 TAF6P49848 677 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 GUCY1B3Q02153 619 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 TMEM132DQ14C87 1099 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 DUOXA1Q1HG43 343 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 HSF5Q4G112 596 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-202ENST00000396629 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 KRT79Q5XKE5 535 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 LMBRD2Q68DH5 695 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-202ENST00000396629 EFCAB13Q8IY85 973 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 HDDC3Q8N4P3 179 aa9.09□□□□□ -0.95
SCFD1-202ENST00000396629 FRMD1Q8N878 549 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms