RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 PDE8BO95263 885 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 TOP3BO95985 862 aaKnown RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 CDH2P19022 906 aaPredicted RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 PEX3P56589 373 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 GPS1Q13098 491 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 PPP2R5EQ16537 467 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 PGS1Q32NB8 556 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 POTEGQ6S5H5 508 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 PACS1Q6VY07 963 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 PSD4Q8NDX1 1056 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 RAD54LQ92698 747 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 NSMCE3Q96MG7 304 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 EDEM3Q9BZQ6 932 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 TIMMDC1Q9NPL8 285 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 RIC8AQ9NPQ8 531 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 MCM9Q9NXL9 1143 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 DDX43Q9NXZ2 648 aaKnown RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 CROCCQ5TZA2 2017 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 A8MXQ7 604 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 TRAFD1O14545 582 aaPredicted RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 GMNNO75496 209 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 CRTAMO95727 393 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 SMARCA1P28370 1054 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 BCAP31P51572 246 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 PKNOX1P55347 436 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 COG2Q14746 738 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 TRIM16LQ309B1 348 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 C12orf50Q8NA57 414 aaPredicted RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 TMEM109Q9BVC6 243 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 PCIF1Q9H4Z3 704 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 LRRC4BQ9NT99 713 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 GPRC5DQ9NZD1 345 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 SAP30BPQ9UHR5 308 aaKnown RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 GNEQ9Y223 722 aaKnown RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 ST14Q9Y5Y6 855 aa7.7□□□□□ -1.18
BDNF-207ENST00000395986 FRMPD2Q68DX3 1309 aaPredicted RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 TRPM3Q9HCF6 1732 aaPredicted RBP7.7□□□□□ -1.18
BDNF-207ENST00000395986 A0A1W2PPW3 197 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 SH3PXD2BA1X283 911 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 NOTOA8MTQ0 251 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 MATN2O00339 956 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 TM7SF2O76062 418 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 MT-ND3P03897 115 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 RALAP11233 206 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 NAT2P11245 290 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 EIF3EP60228 445 aaKnown RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 MYBPC1Q00872 1141 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 NME3Q13232 169 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 MYBPC2Q14324 1141 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 STAT4Q14765 748 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 EDRF1Q3B7T1 1238 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 PDCD4Q53EL6 469 aaKnown RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 ZNF410Q86VK4 478 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 CCDC24Q8N4L8 307 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 SLC4A11Q8NBS3 891 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 FAM156AQ8NDB6 213 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 HNRNPABQ99729 332 aaKnown RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 SNX25Q9H3E2 840 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 TLE6Q9H808 572 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 PLEKHA5Q9HAU0 1116 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 PLGRKTQ9HBL7 147 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 HOMER2Q9NSB8 354 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 PCYOX1Q9UHG3 505 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 TIMM22Q9Y584 194 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 NUB1Q9Y5A7 615 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 ADGRA3Q8IWK6 1321 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 E9PBE3 544 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 I3L4J1 428 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 AIM2O14862 343 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 FAM155BO75949 473 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 KRT75O95678 551 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 TMEM253P0C7T8 217 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 LMNB1P20700 586 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 SOX5P35711 763 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 DRG2P55039 364 aaKnown RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 PPATQ06203 517 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 PDAP1Q13442 181 aaKnown RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 NR1D2Q14995 579 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 GPR107Q5VW38 600 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 KCTD1Q719H9 257 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 CHST15Q7LFX5 561 aaPredicted RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 CLIP4Q8N3C7 705 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 BBS5Q8N3I7 341 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 ZNF564Q8TBZ8 553 aaPredicted RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 WNK4Q96J92 1243 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 CFAP57Q96MR6 1250 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 ANKRD2Q9GZV1 360 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 MAN1C1Q9NR34 630 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 SAE1Q9UBE0 346 aaPredicted RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 PCDHA3Q9Y5H8 950 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 BHMG1C9JSJ3 638 aaPredicted RBP7.69□□□□□ -1.18
BDNF-207ENST00000395986 TP73O15350 636 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 UGT1A9O60656 530 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 KCNH1O95259 989 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 APOEP02649 317 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 C4AP0C0L4 1744 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 C4BP0C0L5 1744 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 USP17L8P0C7I0 530 aa7.69□□□□□ -1.18
BDNF-207ENST00000395986 FAM58BPP0C7Q3 252 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms