RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TBK1Q9UHD2 729 aa18.86■□□□□ 0.61
SREBF1-204ENST00000395756 GOLGA8MH3BSY2 632 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 MYL3P08590 195 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 PDGFRBP09619 1106 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 SMIM10L2AP0DMW4 78 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 SMIM10L2BP0DMW5 78 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 HOXA11P31270 313 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-204ENST00000395756 SYCP2LQ5T4T6 812 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 CYP4F22Q6NT55 531 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 RCOR2Q8IZ40 523 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 CXorf38Q8TB03 319 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 GTF3C2Q8WUA4 911 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-204ENST00000395756 MAIP1Q8WWC4 291 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 CALN1Q9BXU9 219 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 ASB7Q9H672 318 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 PCDHGC3Q9UN70 934 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 TCRBV5S1A1TA0A578 114 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 IVDP26440 423 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 MAP2K2P36507 400 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 RBP5P82980 135 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 ATP11AP98196 1134 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 BYSLQ13895 437 aaKnown RBP18.85■□□□□ 0.61
SREBF1-204ENST00000395756 IZUMO3Q5VZ72 239 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 MRPL45Q9BRJ2 306 aaKnown RBP18.85■□□□□ 0.61
SREBF1-204ENST00000395756 NFKBIZQ9BYH8 718 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 CTNNAL1Q9UBT7 734 aa18.85■□□□□ 0.61
SREBF1-204ENST00000395756 TREHO43280 583 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 LRCH4O75427 683 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 RARGP13631 454 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 YARSP54577 528 aaKnown RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 NRLP54845 237 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 PPP2R2AP63151 447 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 CCNG2Q16589 344 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 FAM110CQ1W6H9 321 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 GRK7Q8WTQ7 553 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 TMEM40Q8WWA1 233 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 ZNF518BQ9C0D4 1074 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 GOLGA2P5Q9HBQ8 144 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 TSPAN16Q9UKR8 245 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 PIN4Q9Y237 131 aaKnown RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 SGK1O00141 431 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 TJP3O95049 919 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 MAP3K6O95382 1288 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 ZNF157P51786 506 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 PIGHQ14442 188 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 FAM187BQ17R55 369 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 C15orf59Q2T9L4 293 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 CST9Q5W186 159 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 SCYL2Q6P3W7 929 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 TLK2Q86UE8 772 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 XYLT1Q86Y38 959 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 OR6B3Q8NGW1 331 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 RUNDC3BQ96NL0 473 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 MIS12Q9H081 205 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 RBM47A0AV96 593 aaKnown RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 IGF2BP3O00425 579 aaKnown RBP eCLIP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 P4HA1P13674 534 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 ITIH2P19823 946 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 ARSEP51690 589 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 SLMAPQ14BN4 828 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 PPP1R15BQ5SWA1 713 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 LRRN4Q8WUT4 740 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 RBM41Q96IZ5 413 aaKnown RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 GCOM2Q9BZD3 368 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-204ENST00000395756 RNF39Q9H2S5 420 aa18.84■□□□□ 0.61
SREBF1-204ENST00000395756 E5RJQ4 531 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 RASGRF2O14827 1237 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 CYP3A5P20815 502 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 GPS1Q13098 491 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 TAF1CQ15572 869 aaPredicted RBP18.83■□□□□ 0.61
SREBF1-204ENST00000395756 IQSEC1Q6DN90 963 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 HOOK3Q86VS8 718 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 KCTD6Q8NC69 237 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 STRIP2Q9ULQ0 834 aa18.83■□□□□ 0.61
SREBF1-204ENST00000395756 CST8O60676 142 aa18.83■□□□□ 0.6
SREBF1-204ENST00000395756 GPD2P43304 727 aa18.83■□□□□ 0.6
SREBF1-204ENST00000395756 SCUBE3Q8IX30 993 aa18.83■□□□□ 0.6
SREBF1-204ENST00000395756 MGARPQ8TDB4 240 aa18.83■□□□□ 0.6
SREBF1-204ENST00000395756 MLXIPLQ9NP71 852 aa18.83■□□□□ 0.6
SREBF1-204ENST00000395756 SIGLEC16A6NMB1 481 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 LIASO43766 372 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 MAGEA9P43362 315 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 EIF3BP55884 814 aaKnown RBP18.82■□□□□ 0.6
SREBF1-204ENST00000395756 PTK6Q13882 451 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 TFDP3Q5H9I0 405 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 PPP1R26Q5T8A7 1209 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-204ENST00000395756 KAT2BQ92831 832 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 EMID1Q96A84 441 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-204ENST00000395756 B3GNT5Q9BYG0 378 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 CACNG4Q9UBN1 327 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 BARX2Q9UMQ3 279 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-204ENST00000395756 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.82■□□□□ 0.6
SREBF1-204ENST00000395756 EBAG9O00559 213 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 RPS6KA5O75582 802 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 PTGISQ16647 500 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 ARFGAP2Q8N6H7 521 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 CCDC89Q8N998 374 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 WHRNQ9P202 907 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 PIAS1O75925 651 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms