RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 CCDC130P13994 396 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 UQCRBP14927 111 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 POLR2EP19388 210 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 KCNA4P22459 653 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 PRAMEP78395 509 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 PTK2Q05397 1052 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 LRP8Q14114 963 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 WDR45BQ5MNZ6 344 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 ARHGEF16Q5VV41 709 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 GMCL1Q96IK5 515 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 PRR12Q9ULL5 1215 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 SPEF1Q9Y4P9 236 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 CHD4Q14839 1912 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 ROBO3Q96MS0 1386 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 PFDN6O15212 129 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 EGFRP00533 1210 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 GH1P01241 217 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 KITP10721 976 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 PLS3P13797 630 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 CCNB1P14635 433 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 EEF1B2P24534 225 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 KPNA1P52294 538 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 IST1P53990 364 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 TPD52P55327 224 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 ZNF200P98182 395 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 CDC16Q13042 620 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 CEP55Q53EZ4 464 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 CCDC137Q6PK04 289 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 SV2BQ7L1I2 683 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 BBOF1Q8ND07 529 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 GMCL1P1Q8NEA9 526 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 PPWD1Q96BP3 646 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 RAVER2Q9HCJ3 691 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 SAR1AQ9NR31 198 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
RAPGEF3-202ENST00000395358 LAMB2P55268 1798 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 GSC2O15499 205 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 ZBTB11O95625 1053 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 PDGFRBP09619 1106 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 KRT3P12035 628 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 VCLP18206 1134 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 PRKACBP22694 351 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 CTNNA2P26232 953 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 HIRAP54198 1017 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 NCKAP1LP55160 1127 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 SLC18A3Q16572 532 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 TRMT10CQ7L0Y3 403 aaKnown RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 POU5F2Q8N7G0 328 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 GATA6Q92908 595 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 BORCS5Q969J3 196 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 MED15Q96RN5 788 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 TPPPO94811 219 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 TXKP42681 527 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 NR1H2P55055 460 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 CALCRLQ16602 461 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 NADK2Q4G0N4 442 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 GABPB2Q8TAK5 448 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 CDHR1Q96JP9 859 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 C9orf72Q96LT7 481 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 HNRNPABQ99729 332 aaKnown RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 EHD1Q9H4M9 534 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 HSPA6P17066 643 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 GUCY1A2P33402 732 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 PLOD1Q02809 727 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 GALNTL6Q49A17 601 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 PERM1Q5SV97 790 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 LPCAT4Q643R3 524 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 NEK10Q6ZWH5 1172 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 INPP4AQ96PE3 977 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 PACSIN1Q9BY11 444 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 OSBPL6Q9BZF3 934 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 SLC7A5P2Q9GIP4 190 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 TPK1Q9H3S4 243 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
RAPGEF3-202ENST00000395358 ABCB11O95342 1321 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 MFN2O95140 757 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 EIF2S1P05198 315 aaKnown RBP11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 HSPA1AP0DMV8 641 aaKnown RBP11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 HSPA1BP0DMV9 641 aaKnown RBP11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 CETPP11597 493 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 CDK4P11802 303 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 ENTPD1P49961 510 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 SLC5A3P53794 718 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 PMS1P54277 932 aaKnown RBP11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 ALDH18A1P54886 795 aaKnown RBP11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 MESDQ14696 234 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 WDR72Q3MJ13 1102 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 RIPOR1Q6ZS17 1223 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 CADM1Q9BY67 442 aaKnown RBP11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 TRIM39Q9HCM9 518 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 ARMCX1Q9P291 453 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 WARS2Q9UGM6 360 aaKnown RBP11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 CHKBQ9Y259 395 aa11.84□□□□□ -0.51
RAPGEF3-202ENST00000395358 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms