RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 BRD9Q9H8M2 597 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 DLL3Q9NYJ7 618 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 MRPS17Q9Y2R5 130 aaKnown RBP9.5□□□□□ -0.89
ATG4A-205ENST00000394892 PCDHB5Q9Y5E4 795 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 COL4A2P08572 1712 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 UBE4BO95155 1302 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 GVINP1Q7Z2Y8 2422 aa9.5□□□□□ -0.89
ATG4A-205ENST00000394892 LRRIQ3A6PVS8 624 aaPredicted RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 NOL4O94818 638 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 C4BPAP04003 597 aaKnown RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 PDGFRBP09619 1106 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 CHRNB1P11230 501 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 USP46P62068 366 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 CLDN10P78369 228 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 ZXDBP98169 803 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 LMNB2Q03252 620 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 SMARCB1Q12824 385 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 DPYDQ12882 1025 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 PPP2R5DQ14738 602 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 CFAP221Q4G0U5 840 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 TDRD10Q5VZ19 366 aaKnown RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 NAIF1Q69YI7 327 aaPredicted RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 TSSK4Q6SA08 328 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 STXBP4Q6ZWJ1 553 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 DCLK2Q8N568 766 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 SPATA18Q8TC71 538 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 C2orf15Q8WU43 125 aaKnown RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 DEPDC1BQ8WUY9 529 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 NELL1Q92832 810 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 USP13Q92995 863 aaPredicted RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 MYLPFQ96A32 169 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 ANKRD36BP1Q96IX9 119 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 SPATA32Q96LK8 384 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 SYT15Q9BQS2 421 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 GPR88Q9GZN0 384 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 SLITRK6Q9H5Y7 841 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 KIAA1586Q9HCI6 787 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 ABCB6Q9NP58 842 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 HPS4Q9NQG7 708 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 RBM12Q9NTZ6 932 aaKnown RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 GTSE1Q9NYZ3 720 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 CDV3Q9UKY7 258 aaKnown RBP9.49□□□□□ -0.89
ATG4A-205ENST00000394892 PIAS3Q9Y6X2 628 aa9.49□□□□□ -0.89
ATG4A-205ENST00000394892 F5P12259 2224 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 WDR87Q6ZQQ6 2873 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 SLC38A8A6NNN8 435 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 ZNF263O14978 683 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 CHADO15335 359 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 TACC1O75410 805 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 TNNC2P02585 160 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 RPN1P04843 607 aaKnown RBP9.48□□□□□ -0.89
ATG4A-205ENST00000394892 CCNE1P24864 410 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 MAGEA11P43364 429 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 RPS9P46781 194 aaKnown RBP9.48□□□□□ -0.89
ATG4A-205ENST00000394892 LHX1P48742 406 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 CDH8P55286 799 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
ATG4A-205ENST00000394892 KRT85P78386 507 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 TSPY1Q01534 308 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 MTAPQ13126 283 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 SURF1Q15526 300 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 NFE2Q16621 373 aaPredicted RBP9.48□□□□□ -0.89
ATG4A-205ENST00000394892 ZCWPW2Q504Y3 356 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 ZNF852Q6ZMS4 543 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 KRBA2Q6ZNG9 492 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 PAQR9Q6ZVX9 377 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 ITIH5Q86UX2 942 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 MON1AQ86VX9 555 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 SLC9A9Q8IVB4 645 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 CEP57L1Q8IYX8 460 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 CMTM8Q8IZV2 173 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 MAB21L3Q8N8X9 362 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 FSIP1Q8NA03 581 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 SUMF1Q8NBK3 374 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 IRF7Q92985 503 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 PCED1BQ96HM7 432 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 MYRFLQ96LU7 910 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 CYP2S1Q96SQ9 504 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 FAM83CQ9BQN1 747 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 FAM126AQ9BYI3 521 aaPredicted RBP9.48□□□□□ -0.89
ATG4A-205ENST00000394892 SMYD3Q9H7B4 428 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 FBRSL1Q9HCM7 1045 aaKnown RBP9.48□□□□□ -0.89
ATG4A-205ENST00000394892 ZSCAN32Q9NX65 697 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 GCNT4Q9P109 453 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 RAB23Q9ULC3 237 aa9.48□□□□□ -0.89
ATG4A-205ENST00000394892 NDRG2Q9UN36 371 aaKnown RBP9.48□□□□□ -0.89
ATG4A-205ENST00000394892 MYH15Q9Y2K3 1946 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 A0A1W2PQ27 194 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 A0A1W2PQ64 194 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 A0A1W2PQD8 194 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 C2orf78A6NCI8 922 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 ANTXRLA6NF34 631 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 CLDN5O00501 218 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 PDXKO00764 312 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 EXOC3O60645 756 aa9.47□□□□□ -0.89
ATG4A-205ENST00000394892 RHOBTB3O94955 611 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms