RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 MTMR10Q9NXD2 777 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 GDAP2Q9NXN4 497 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
SRSF5-201ENST00000394366 GIT1Q9Y2X7 761 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 PCDHA11Q9Y5I1 949 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 SNX9Q9Y5X1 595 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 TRIP11Q15643 1979 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 KRIT1O00522 736 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 AMHP03971 560 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 PEX5P50542 639 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 NDST1P52848 882 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 SNX16P57768 344 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 PAK2Q13177 524 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 DNAJC24Q6P3W2 148 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.152e-8■■□□□ 11.4
SRSF5-201ENST00000394366 FAM43BQ6ZT52 329 aaPredicted RBP14.12□□□□□ -0.15
SRSF5-201ENST00000394366 DPH6Q7L8W6 267 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 C3orf20Q8ND61 904 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 C18orf25Q96B23 403 aaPredicted RBP14.12□□□□□ -0.15
SRSF5-201ENST00000394366 HEXIM2Q96MH2 286 aaKnown RBP14.12□□□□□ -0.15
SRSF5-201ENST00000394366 NKX2-4Q9H2Z4 354 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 TTYH1Q9H313 450 aaPredicted RBP14.12□□□□□ -0.15
SRSF5-201ENST00000394366 SLITRK6Q9H5Y7 841 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 EHD2Q9NZN4 543 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 STIM2Q9P246 746 aa14.12□□□□□ -0.15
SRSF5-201ENST00000394366 YBX2Q9Y2T7 364 aaKnown RBP14.12□□□□□ -0.15
SRSF5-201ENST00000394366 TET1Q8NFU7 2136 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 O00370 1275 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 PSTPIP1O43586 416 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 ZNF623O75123 536 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 FGGP02679 453 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 SETSIPP0DME0 302 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 MYOGP15173 224 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 TNFRSF8P28908 595 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 VSNL1P62760 191 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 PTPROQ16827 1216 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 LONRF2Q1L5Z9 754 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 GLRA4Q5JXX5 417 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 LCLAT1Q6UWP7 414 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 MRPL10Q7Z7H8 261 aaKnown RBP14.11□□□□□ -0.15
SRSF5-201ENST00000394366 MAIP1Q8WWC4 291 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 ZBED2Q9BTP6 218 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 RNF39Q9H2S5 420 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 AGO3Q9H9G7 860 aaKnown RBP14.11□□□□□ -0.15
SRSF5-201ENST00000394366 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 ERVK-5Q9HDB9 667 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 UBN1Q9NPG3 1134 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 SMARCAL1Q9NZC9 954 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 KLK14Q9P0G3 267 aa14.11□□□□□ -0.15
SRSF5-201ENST00000394366 CHORDC1Q9UHD1 332 aaPredicted RBP14.11□□□□□ -0.15
SRSF5-201ENST00000394366 KPNA7A9QM74 516 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 RRP9O43818 475 aaKnown RBP14.1□□□□□ -0.15
SRSF5-201ENST00000394366 TLL1O43897 1013 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 ZRANB2O95218 330 aaKnown RBP eCLIP14.1□□□□□ -0.153e-7■■■■□ 25.7
SRSF5-201ENST00000394366 PAX3P23760 479 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 CD52P31358 61 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 ZNF268Q14587 947 aaPredicted RBP14.1□□□□□ -0.15
SRSF5-201ENST00000394366 DCAF12L1Q5VU92 463 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 DENND1BQ6P3S1 775 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 DCUN1D2Q6PH85 259 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 MAATS1Q7Z4T9 603 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 TMCO2Q7Z6W1 182 aaPredicted RBP14.1□□□□□ -0.15
SRSF5-201ENST00000394366 WDTC1Q8N5D0 677 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 TOP6BLQ8N6T0 577 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 CCDC26Q8TAB7 109 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 IPO4Q8TEX9 1081 aaKnown RBP14.1□□□□□ -0.15
SRSF5-201ENST00000394366 ALG3Q92685 438 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 PGBD4Q96DM1 585 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 C18orf8Q96DM3 657 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 RUNDC3BQ96NL0 473 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 PPP1R10Q96QC0 940 aaKnown RBP14.1□□□□□ -0.15
SRSF5-201ENST00000394366 TWNKQ96RR1 684 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 LRRC1Q9BTT6 524 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 SYNCQ9H7C4 482 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
SRSF5-201ENST00000394366 PADI3Q9ULW8 664 aa14.1□□□□□ -0.15
SRSF5-201ENST00000394366 TCRBV5S1A1TA0A578 114 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 FAM170AA1A519 330 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 TMEM191CA6NGB0 347 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 M0QYV0 167 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 HUS1O60921 280 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 MICAL2O94851 1124 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 GABRB2P47870 512 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 PIGHQ14442 188 aaPredicted RBP14.09□□□□□ -0.15
SRSF5-201ENST00000394366 FAM117BQ6P1L5 589 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 RHOT1Q8IXI2 618 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 IFT20Q8IY31 132 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 EIF1ADQ8N9N8 165 aaKnown RBP14.09□□□□□ -0.15
SRSF5-201ENST00000394366 APPL2Q8NEU8 664 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 FNIP1Q8TF40 1166 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRSF5-201ENST00000394366 BTBD6Q96KE9 485 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 KRT12Q99456 494 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRSF5-201ENST00000394366 HESX1Q9UBX0 185 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 HMGXB4Q9UGU5 601 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 MTUS1Q9ULD2 1270 aa14.09□□□□□ -0.15
SRSF5-201ENST00000394366 SCN1AP35498 2009 aa14.08□□□□□ -0.15
SRSF5-201ENST00000394366 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms