RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MYO1EQ12965 1108 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 FSTL4Q6MZW2 842 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 FAM171BQ6P995 826 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 PRR23CQ6ZRP0 262 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 CCDC65Q8IXS2 484 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 GPD1LQ8N335 351 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 CAMKK1Q8N5S9 505 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 ZSWIM2Q8NEG5 633 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 LRRC27Q9C0I9 530 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 EBF3Q9H4W6 596 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 SIX4Q9UIU6 781 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 SNX9Q9Y5X1 595 aa18.77■□□□□ 0.6
SNRPA1-202ENST00000394082 OTOL1A6NHN0 477 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 TADA3O75528 432 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 TMEM191BP0C7N4 346 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 CYP2F1P24903 491 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 SOWAHAQ2M3V2 549 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 ADGRF2Q8IZF7 708 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 FAM160A2Q8N612 972 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 KIAA1958Q8N8K9 716 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 FSIP1Q8NA03 581 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 GAB3Q8WWW8 586 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 ANKRD36BP1Q96IX9 119 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 TNMDQ9H2S6 317 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 CUEDC2Q9H467 287 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 KIAA1586Q9HCI6 787 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 PDE11AQ9HCR9 933 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 INTS13Q9NVM9 706 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 GTF3C4Q9UKN8 822 aa18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 MAGED2Q9UNF1 606 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.76■□□□□ 0.59
SNRPA1-202ENST00000394082 ZNF638Q14966 1978 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 A0A087X0B3 334 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 USP17L7P0C7H9 530 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 NASPP49321 788 aaPredicted RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 GPR15P49685 360 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 PDE6CP51160 858 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 CDR1P51861 262 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 MTF1Q14872 753 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 MAPRE1Q15691 268 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 DDR2Q16832 855 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 HEATR6Q6AI08 1181 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 CNNM4Q6P4Q7 775 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 VSTM1Q6UX27 236 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 C4orf50Q6ZRC1 276 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 CEP68Q76N32 757 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 SPATA2LQ8IUW3 424 aaPredicted RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 CPA6Q8N4T0 437 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 RIN3Q8TB24 985 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 OSCP1Q8WVF1 389 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 DDX1Q92499 740 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 SPATA17Q96L03 361 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 KBTBD4Q9NVX7 518 aa18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 R3HCC1Q9Y3T6 440 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-202ENST00000394082 TRAV19A0A0A6YYK7 116 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 ZNF233A6NK53 670 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 EIF3DO15371 548 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 KRT19P08727 400 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 FAM163BP0C2L3 166 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 ACAT1P24752 427 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 RAP1GAPP47736 663 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 LIMK1P53667 647 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 USP4Q13107 963 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 ZNF77Q15935 545 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 DUOXA2Q1HG44 320 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 TRIM68Q6AZZ1 485 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 FAM173BQ6P4H8 233 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 CACNA2D4Q7Z3S7 1137 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 OSTM1Q86WC4 334 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 CCDC26Q8TAB7 109 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 ATP2A3Q93084 1043 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 ZC3H10Q96K80 434 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 FGFBP2Q9BYJ0 223 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 ECT2Q9H8V3 914 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 EHD2Q9NZN4 543 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 GCNT4Q9P109 453 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 CDH9Q9ULB4 789 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 SLC8A2Q9UPR5 921 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 MTMR6Q9Y217 621 aa18.74■□□□□ 0.59
SNRPA1-202ENST00000394082 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 DCDC2BA2VCK2 349 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 GOLGA8IPA6NC78 632 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 GOLGA8JA6NMD2 632 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 RPP40O75818 363 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 PRPF6O94906 941 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 TNNC2P02585 160 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 ADRB1P08588 477 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 ARSAP15289 507 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 GJA4P35212 333 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 GALK1P51570 392 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 SNRPFP62306 86 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 SDHAF4Q5VUM1 108 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 PKN3Q6P5Z2 889 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 HPDLQ96IR7 371 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 P2RY13Q9BPV8 354 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms