RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SEL1L2Q5TEA6 688 aa20.77■□□□□ 0.92
RAB5C-202ENST00000393860 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.77■□□□□ 0.92
RAB5C-202ENST00000393860 IPO4Q8TEX9 1081 aaKnown RBP20.77■□□□□ 0.92
RAB5C-202ENST00000393860 DDX47Q9H0S4 455 aaKnown RBP20.77■□□□□ 0.92
RAB5C-202ENST00000393860 HESX1Q9UBX0 185 aa20.77■□□□□ 0.92
RAB5C-202ENST00000393860 DMGDHQ9UI17 866 aaKnown RBP20.77■□□□□ 0.92
RAB5C-202ENST00000393860 RAB21Q9UL25 225 aa20.77■□□□□ 0.92
RAB5C-202ENST00000393860 F8VP50 259 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 KRT3P12035 628 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 PDE4CQ08493 712 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 GRIK3Q13003 919 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 GPNMBQ14956 572 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 PKDCCQ504Y2 493 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 CCDC70Q6NSX1 233 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 PMF1Q6P1K2 205 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 CRYBG2Q8N1P7 616 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 SLC2A14Q8TDB8 520 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 PIWIL1Q96J94 861 aaKnown RBP20.76■□□□□ 0.91
RAB5C-202ENST00000393860 KLHL11Q9NVR0 708 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 ZNF446Q9NWS9 450 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 F8W810 466 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 TKTP29401 623 aaKnown RBP20.76■□□□□ 0.91
RAB5C-202ENST00000393860 BRCC3P46736 316 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 BFSP2Q13515 415 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 FAM102AQ5T9C2 384 aaPredicted RBP20.76■□□□□ 0.91
RAB5C-202ENST00000393860 ARHGAP17Q68EM7 881 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 OR6B2Q6IFH4 312 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 FAM183BPQ6ZVS7 135 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 SLC24A5Q71RS6 500 aa20.76■□□□□ 0.91
RAB5C-202ENST00000393860 GSPT2Q8IYD1 628 aaKnown RBP20.76■□□□□ 0.91
RAB5C-202ENST00000393860 TTC7AQ9ULT0 858 aaPredicted RBP20.76■□□□□ 0.91
RAB5C-202ENST00000393860 TCRBV7S2A1N4TA0A589 114 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 SIGLEC16A6NMB1 481 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 B4GALT3O60512 393 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 GABRB2P47870 512 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 TIGD5Q53EQ6 642 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 CLLU1OSQ5K130 101 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 KIAA0319Q5VV43 1072 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 B3GALNT2Q8NCR0 500 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 DBF4BQ8NFT6 615 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 DDX27Q96GQ7 796 aaKnown RBP20.75■□□□□ 0.91
RAB5C-202ENST00000393860 UBN1Q9NPG3 1134 aa20.75■□□□□ 0.91
RAB5C-202ENST00000393860 DDX43Q9NXZ2 648 aaKnown RBP20.75■□□□□ 0.91
RAB5C-202ENST00000393860 CLDN5O00501 218 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 RAD51CO43502 376 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 B3GAT3O94766 335 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 HSPA6P17066 643 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 PSMA2P25787 234 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 RPL9P32969 192 aaKnown RBP20.74■□□□□ 0.91
RAB5C-202ENST00000393860 TAP1Q03518 808 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 TUSC3Q13454 348 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 ZNF268Q14587 947 aaPredicted RBP20.74■□□□□ 0.91
RAB5C-202ENST00000393860 TCTN1Q2MV58 587 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 CC2D1AQ6P1N0 951 aaPredicted RBP20.74■□□□□ 0.91
RAB5C-202ENST00000393860 MCRS1Q96EZ8 462 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 SCLYQ96I15 445 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 WDR35Q9P2L0 1181 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 SCN5AQ14524 2016 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 TARSL2A2RTX5 802 aaKnown RBP20.74■□□□□ 0.91
RAB5C-202ENST00000393860 ZSCAN5CA6NGD5 496 aaPredicted RBP20.74■□□□□ 0.91
RAB5C-202ENST00000393860 GRAP2O75791 330 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 GABBR2O75899 941 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 ITGB1P05556 798 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 MAN1A1P33908 653 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 ATP13A4Q4VNC1 1196 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 MDH1BQ5I0G3 518 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 TMCO3Q6UWJ1 677 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 RHOT1Q8IXI2 618 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 ACSF2Q96CM8 615 aaPredicted RBP20.74■□□□□ 0.91
RAB5C-202ENST00000393860 TNIP3Q96KP6 325 aa20.74■□□□□ 0.91
RAB5C-202ENST00000393860 GABRDO14764 452 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 PTPN1P18031 435 aaKnown RBP20.73■□□□□ 0.91
RAB5C-202ENST00000393860 MNX1P50219 401 aaPredicted RBP20.73■□□□□ 0.91
RAB5C-202ENST00000393860 CCL23P55773 120 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 BRD3Q15059 726 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 GLB1LQ6UWU2 654 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 CD300LGQ6UXG3 332 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 ZNF280BQ86YH2 543 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 ZDHHC14Q8IZN3 488 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 DIS3LQ8TF46 1054 aaKnown RBP20.73■□□□□ 0.91
RAB5C-202ENST00000393860 SLC35F5Q8WV83 523 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 PPP1R12CQ9BZL4 782 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 MIS12Q9H081 205 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 TSC2P49815 1807 aa20.73■□□□□ 0.91
RAB5C-202ENST00000393860 MYBL2P10244 700 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 GSCP56915 257 aaPredicted RBP20.72■□□□□ 0.91
RAB5C-202ENST00000393860 TXNRD3NBQ6F5E7 133 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 WDR93Q6P2C0 686 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 CCDC50Q8IVM0 306 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 ANKRD52Q8NB46 1076 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 B3GNT5Q9BYG0 378 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.72■□□□□ 0.91
RAB5C-202ENST00000393860 CCDC151A5D8V7 595 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 PSTPIP1O43586 416 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 DDHD2O94830 711 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 HEXIM1O94992 359 aaKnown RBP20.72■□□□□ 0.91
RAB5C-202ENST00000393860 EOMESO95936 686 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 GLI1P08151 1106 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 GATMP50440 423 aa20.72■□□□□ 0.91
RAB5C-202ENST00000393860 BCAT1P54687 386 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms