RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 TRIM17Q9Y577 477 aa6.05□□□□□ -1.44
NPM1-203ENST00000393820 PCDHA13Q9Y5I0 950 aa6.05□□□□□ -1.44
NPM1-203ENST00000393820 FAM169AQ9Y6X4 670 aa6.05□□□□□ -1.44
NPM1-203ENST00000393820 ECM29Q5VYK3 1845 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 SSU72P8A0A1W2PR75 194 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 CYP26A1O43174 497 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 PRDM1O75626 825 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 PLEKHA8P1O95397 391 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 CBX7O95931 251 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 SRGAP2CP0DJJ0 459 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 LCP1P13796 627 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 PLS3P13797 630 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 KLRK1P26718 216 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 MCM7P33993 719 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 RECQLP46063 649 aaPredicted RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 CCT5P48643 541 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 KPNA1P52294 538 aaPredicted RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 GSCP56915 257 aaPredicted RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 SESN3P58005 492 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 ORC2Q13416 577 aaPredicted RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 CYP27C1Q4G0S4 372 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 SBK1Q52WX2 424 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 CAVIN4Q5BKX8 364 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 FAM83AQ86UY5 434 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 IQCKQ8N0W5 287 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 C3orf20Q8ND61 904 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 C1orf162Q8NEQ5 155 aaPredicted RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 TIFAQ96CG3 184 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 CAPZA3Q96KX2 299 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 FCRL3Q96P31 734 aaPredicted RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 RUFY1Q96T51 708 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 MYCBPQ99417 103 aaPredicted RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 RIOK1Q9BRS2 568 aaKnown RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 LRRC1Q9BTT6 524 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 SH2D4AQ9H788 454 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 VEZTQ9HBM0 779 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.04□□□□□ -1.44
NPM1-203ENST00000393820 GDAQ9Y2T3 454 aa6.04□□□□□ -1.44
NPM1-203ENST00000393820 MKI67P46013 3256 aaKnown RBP6.04□□□□□ -1.44
NPM1-203ENST00000393820 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 PVALEFA0A1B0GWK0 134 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 GRID2IPA4D2P6 1211 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 B4DLN1 442 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 IGF2BP3O00425 579 aaKnown RBP eCLIP6.03□□□□□ -1.444e-7■■□□□ 12.3
NPM1-203ENST00000393820 IFRD1O00458 451 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 PES1O00541 588 aaKnown RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 CES2O00748 559 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 FSBPO95073 299 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 SOD2P04179 222 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 CETPP11597 493 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 GNGT1P63211 74 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 SETQ01105 290 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 CRHR2Q13324 411 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 DRP2Q13474 957 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 PRKG1Q13976 671 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 KIF22Q14807 665 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 PCBP2Q15366 365 aaKnown RBP eCLIP6.03□□□□□ -1.441e-6■■■□□ 19.1
NPM1-203ENST00000393820 KIZQ2M2Z5 673 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 CCDC96Q2M329 555 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 CFAP221Q4G0U5 840 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 MIIPQ5JXC2 388 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 PPP4R3AQ6IN85 833 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 CENPPQ6IPU0 288 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 RCSD1Q6JBY9 416 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 KDM7AQ6ZMT4 941 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 EPM2AIP1Q7L775 607 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 ERO1BQ86YB8 467 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 CNPY4Q8N129 248 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 PLD6Q8N2A8 252 aaKnown RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 RIN2Q8WYP3 895 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 SYN2Q92777 582 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 SLC5A5Q92911 643 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 TEKT1Q969V4 418 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 OPTNQ96CV9 577 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 ASIC4Q96FT7 647 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 CLMNQ96JQ2 1002 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 FAM84BQ96KN1 310 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 OSBPL9Q96SU4 736 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 ARPC5LQ9BPX5 153 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 LZTS2Q9BRK4 669 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 SARGQ9BW04 601 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 IFIH1Q9BYX4 1025 aaKnown RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 R3HDMLQ9H3Y0 253 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 PRDM5Q9NQX1 630 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 GDF3Q9NR23 364 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 ATP8A2Q9NTI2 1148 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 TCP11L1Q9NUJ3 509 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 C14orf119Q9NWQ9 140 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 TMOD2Q9NZR1 351 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 H2AFY2Q9P0M6 372 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 CLEC1BQ9P126 229 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 ZNF70Q9UC06 446 aaPredicted RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 ZC3H7BQ9UGR2 993 aaKnown RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 ZBTB21Q9ULJ3 1066 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 SCAF8Q9UPN6 1271 aaKnown RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 ANKRD6Q9Y2G4 727 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 GRIN2DO15399 1336 aa6.03□□□□□ -1.44
NPM1-203ENST00000393820 MYO5AQ9Y4I1 1855 aaKnown RBP6.03□□□□□ -1.44
NPM1-203ENST00000393820 CLRN2A0PK11 232 aa6.02□□□□□ -1.45
NPM1-203ENST00000393820 MACROD2A1Z1Q3 448 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms