RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLC2A14Q8TDB8 520 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 HASPINQ8TF76 798 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 SEPT8Q92599 483 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 CD101Q93033 1021 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 SCLYQ96I15 445 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PPP1R12CQ9BZL4 782 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 MIS12Q9H081 205 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 METTL5Q9NRN9 209 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 DDX43Q9NXZ2 648 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
TDP1-203ENST00000393454 TCRBV5S1A1TA0A578 114 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 SIGLEC16A6NMB1 481 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 E5RJQ4 531 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 TULP2O00295 520 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PITPNM1O00562 1244 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 ENPP3O14638 875 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 ATP2C2O75185 946 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 FAM163BP0C2L3 166 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PTPN1P18031 435 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 BRCC3P46736 316 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 LHX1P48742 406 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PEX5P50542 639 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 CCL23P55773 120 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 FAM189BP81408 668 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 TLE2Q04725 743 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PDE4CQ08493 712 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 TRIM60Q495X7 471 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 TIGD5Q53EQ6 642 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PLEKHG4Q58EX7 1191 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 NOMO2Q5JPE7 1267 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 FAM102AQ5T9C2 384 aaPredicted RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 ARHGAP17Q68EM7 881 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 METTL23Q86XA0 190 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 KLHL7Q8IXQ5 586 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 ABI1Q8IZP0 508 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 B3GALNT2Q8NCR0 500 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 UROC1Q96N76 676 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 FAM193BQ96PV7 902 aaPredicted RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 KRT12Q99456 494 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 NAP1L3Q99457 506 aaPredicted RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 MED10Q9BTT4 135 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 LRRC1Q9BTT6 524 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 HIPK3Q9H422 1215 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 LRFN2Q9ULH4 789 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PCDHB7Q9Y5E2 793 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 CEP350Q5VT06 3117 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 SETSIPP0DME0 302 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PYGMP11217 842 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 ODC1P11926 461 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PSMA2P25787 234 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 RFC1P35251 1148 aaPredicted RBP9.11□□□□□ -0.95
TDP1-203ENST00000393454 GABRB2P47870 512 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 SNX16P57768 344 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 C1QTNF8P60827 252 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 BST2Q10589 180 aaKnown RBP9.11□□□□□ -0.95
TDP1-203ENST00000393454 PIGHQ14442 188 aaPredicted RBP9.11□□□□□ -0.95
TDP1-203ENST00000393454 MDH1BQ5I0G3 518 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CLLU1OSQ5K130 101 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 C8orf74Q6P047 294 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PMF1Q6P1K2 205 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CC2D1AQ6P1N0 951 aaPredicted RBP9.11□□□□□ -0.95
TDP1-203ENST00000393454 FBXO46Q6PJ61 603 aaPredicted RBP9.11□□□□□ -0.95
TDP1-203ENST00000393454 DCLRE1AQ6PJP8 1040 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 RHOT1Q8IXI2 618 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 TMEM86AQ8N2M4 240 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 ANKRD52Q8NB46 1076 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 JOSD2Q8TAC2 188 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 MCRS1Q96EZ8 462 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 ZNF333Q96JL9 665 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PNKPQ96T60 521 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 HINFPQ9BQA5 517 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PLVAPQ9BX97 442 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CRISPLD2Q9H0B8 497 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 TMEM161AQ9NX61 479 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 LCMT1Q9UIC8 334 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 ATP11BQ9Y2G3 1177 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 F8VP50 259 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CLDN5O00501 218 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 GABRDO14764 452 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CYP2C18P33260 490 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 MAN1A1P33908 653 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 OR1G1P47890 313 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 BCAT1P54687 386 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 SLC8A3P57103 927 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 TAS2R40P59535 323 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 OGDHQ02218 1023 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 FAAP100Q0VG06 881 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 GPNMBQ14956 572 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 LLGL1Q15334 1064 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CLUL1Q15846 466 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CCDC142Q17RM4 750 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 ODF2Q5BJF6 829 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 FAM183BPQ6ZVS7 135 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 ANKRD33Q7Z3H0 272 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 DEFB128Q7Z7B8 93 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 ZNF280BQ86YH2 543 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 CCDC50Q8IVM0 306 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms