RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MUTP22033 750 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 CHRNA5P30532 468 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 FDFT1P37268 417 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 PLOD1Q02809 727 aaPredicted RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 MCL1Q07820 350 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 FAM83EQ2M2I3 478 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 APLFQ8IW19 511 aaPredicted RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 EFHBQ8N7U6 833 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 RIC8BQ9NVN3 520 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 NDUFA13Q9P0J0 144 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 TPST1O60507 370 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 DDX5P17844 614 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 TGM2P21980 687 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 PCSK1P29120 753 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 PTENP60484 403 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 OTUD4Q01804 1114 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 SLC25A41Q8N5S1 370 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 LRRN4CLQ8ND94 238 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 NAT9Q9BTE0 207 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 ZBED2Q9BTP6 218 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 CATSPERBQ9H7T0 1116 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 GPRC5CQ9NQ84 441 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 PKP3Q9Y446 797 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 MYO1GB0I1T2 1018 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 KRT8P05787 483 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 EPHB2P29323 1055 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 MTFR1Q15390 333 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 KCNT1Q5JUK3 1230 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 DENND1BQ6P3S1 775 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 EFL1Q7Z2Z2 1120 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 TAAR1Q96RJ0 339 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 PAFAH2Q99487 392 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 DDX50Q9BQ39 737 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 TMEM161AQ9NX61 479 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 CD274Q9NZQ7 290 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 HBP1O60381 514 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 PROSCO94903 275 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 THRAP10827 490 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 CCNG2Q16589 344 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 EFCAB12Q6NXP0 572 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 SCUBE1Q8IWY4 988 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
LCA5-202ENST00000392959 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
LCA5-202ENST00000392959 ZSCAN5CA6NGD5 496 aaPredicted RBP13.63□□□□□ -0.23
LCA5-202ENST00000392959 OGTO15294 1046 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 ALBP02768 609 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 ITGA4P13612 1032 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 CALB2P22676 271 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 CLK1P49759 484 aaKnown RBP13.63□□□□□ -0.23
LCA5-202ENST00000392959 MICU2Q8IYU8 434 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 EXD1Q8NHP7 514 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 GPRASP2Q96D09 838 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 EFCAB1Q9HAE3 211 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 ATP11BQ9Y2G3 1177 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 DYNC1LI2O43237 492 aaPredicted RBP13.63□□□□□ -0.23
LCA5-202ENST00000392959 GH1P01241 217 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 ITGB3P05106 788 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 SREBF1P36956 1147 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 RGS4P49798 205 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 PKN1Q16512 942 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 KBTBD12Q3ZCT8 623 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 LINC00523Q86TU6 105 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 ZC3H4Q9UPT8 1303 aaKnown RBP13.63□□□□□ -0.23
LCA5-202ENST00000392959 WDR47O94967 919 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 MAP3K6O95382 1288 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 HMBSP08397 361 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 ZCCHC18P0CG32 403 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 SV2CQ496J9 727 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 TJAP1Q5JTD0 557 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
LCA5-202ENST00000392959 TLR10Q9BXR5 811 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 FBXO28Q9NVF7 368 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 DCDC2Q9UHG0 476 aa13.63□□□□□ -0.23
LCA5-202ENST00000392959 CDV3Q9UKY7 258 aaKnown RBP13.63□□□□□ -0.23
LCA5-202ENST00000392959 CPS1P31327 1500 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 PTPN7P35236 360 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 GNL1P36915 607 aaPredicted RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 LRRC74AQ0VAA2 488 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 IL31Q6EBC2 164 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 SLC26A11Q86WA9 606 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 P3H2Q8IVL5 708 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 FBXL16Q8N461 479 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 TAS1R2Q8TE23 839 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 ATG4CQ96DT6 458 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 ZNF556Q9HAH1 456 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 PALMDQ9NP74 551 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 SCN3BQ9NY72 215 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 ERAP1Q9NZ08 941 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms