RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TSHZ1Q6ZSZ6 1077 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 MICU3Q86XE3 530 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 COL23A1Q86Y22 540 aaPredicted RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 OR6B3Q8NGW1 331 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 NELL1Q92832 810 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 APIPQ96GX9 242 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 FBXL20Q96IG2 436 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 LRGUKQ96M69 825 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 P2RX7Q99572 595 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 RIOX1Q9H6W3 641 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 ARMT1Q9H993 441 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 PRDM11Q9NQV5 511 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 DDX21Q9NR30 783 aaKnown RBP eCLIP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 OBP2AQ9NY56 170 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 EHD3Q9NZN3 535 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 NDRG4Q9ULP0 352 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 NOB1Q9ULX3 412 aaKnown RBP2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 SHOC2Q9UQ13 582 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 TMX2Q9Y320 296 aa2.91□□□□□ -1.94
RNU6-541P-201ENST00000384709 A0A1W2PPL8 197 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 TRIM43BA6NCK2 446 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 MBD3L4A6NDZ8 208 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 MBD3L3A6NE82 208 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 BTN3A1O00481 513 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 TPP1O14773 563 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 TBX3O15119 743 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 SLC16A3O15427 465 aaKnown RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ORC4O43929 436 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 TLR5O60602 858 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 VPS4BO75351 444 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 NXPH3O95157 252 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 CSF1RP07333 972 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 MYF5P13349 255 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 KCNJ5P48544 419 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 PXNP49023 591 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 DGKEP52429 567 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 UCP3P55916 312 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 LILRA4P59901 499 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 FAM193AP78312 1265 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 SEMA5AQ13591 1074 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 POLD3Q15054 466 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZIK1Q3SY52 487 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZNF618Q5T7W0 954 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 LMBRD2Q68DH5 695 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 FBXO42Q6P3S6 717 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 TMEM108Q6UXF1 575 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZNF783Q6ZMS7 281 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 WDR53Q7Z5U6 358 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 KRT78Q8N1N4 520 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 BOLLQ8N9W6 283 aaKnown RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 FBXO41Q8TF61 875 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ATRIPQ8WXE1 791 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 TFAP2BQ92481 460 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 TRIM43Q96BQ3 446 aaPredicted RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 SARAFQ96BY9 339 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 RSPRY1Q96DX4 576 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 NAF1Q96HR8 494 aaKnown RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 PUS7Q96PZ0 661 aaKnown RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ACTRT3Q9BYD9 372 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZNF518BQ9C0D4 1074 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 BTBD1Q9H0C5 482 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 DHX36Q9H2U1 1008 aaKnown RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 FAM204AQ9H8W3 233 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 KLHL42Q9P2K6 505 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 STAP2Q9UGK3 403 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 DDX20Q9UHI6 824 aaKnown RBP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 CAPN11Q9UMQ6 739 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 GABRQQ9UN88 632 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 USP19O94966 1318 aa2.9□□□□□ -1.95
RNU6-541P-201ENST00000384709 WIPF3A6NGB9 483 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 LINC00473A8K010 186 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 CCP110O43303 1012 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 URI1O94763 535 aaPredicted RBP2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 JUPP14923 745 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZFXP17010 805 aaPredicted RBP2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 RHCEP18577 417 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 CHRM3P20309 590 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 KCNA3P22001 575 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 TTC3P53804 2025 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 RHDQ02161 417 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 MYO1EQ12965 1108 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 RAB32Q13637 225 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 E2F2Q14209 437 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 GRM3Q14832 879 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 RNF220Q5VTB9 566 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 SYCE2Q6PIF2 218 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 ZNF551Q7Z340 670 aaPredicted RBP2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 RD3Q7Z3Z2 195 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 MAVSQ7Z434 540 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 C14orf80Q86SX3 495 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 DGKHQ86XP1 1220 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 DNAJC5GQ8N7S2 189 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 TOR1AIP2Q8NFQ8 470 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 SOCS4Q8WXH5 440 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 TSR2Q969E8 191 aaKnown RBP2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 FKBP10Q96AY3 582 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 C8orf48Q96LL4 319 aa2.89□□□□□ -1.95
RNU6-541P-201ENST00000384709 CRAMP1Q96RY5 1269 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms