RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 NR4A1P22736 598 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 GSSP48637 474 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 TRPC1P48995 793 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 MTM1Q13496 603 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 SF3B4Q15427 424 aaKnown RBP eCLIP15.72■□□□□ 0.11
VLDLR-202ENST00000382099 FAM209AQ5JX71 171 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 ATP2A3Q93084 1043 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 LRGUKQ96M69 825 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 BTBD9Q96Q07 612 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 TRIM56Q9BRZ2 755 aaKnown RBP15.72■□□□□ 0.11
VLDLR-202ENST00000382099 VTA1Q9NP79 307 aa15.72■□□□□ 0.11
VLDLR-202ENST00000382099 PRR5-ARHGAP8B1AHC4 643 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 IL2RBP14784 551 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 ARHGAP8P85298 464 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 NSMFQ6X4W1 530 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 KIF6Q6ZMV9 814 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 ARID3BQ8IVW6 561 aaPredicted RBP15.71■□□□□ 0.11
VLDLR-202ENST00000382099 TSPAN14Q8NG11 270 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 HAUS8Q9BT25 410 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 HEMGNQ9BXL5 484 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
VLDLR-202ENST00000382099 TCEA3O75764 348 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 NAT2P11245 290 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 PDIA2Q13087 525 aaKnown RBP15.71■□□□□ 0.11
VLDLR-202ENST00000382099 UBAP2LQ14157 1087 aaKnown RBP15.71■□□□□ 0.11
VLDLR-202ENST00000382099 KCNJ8Q15842 424 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 ARL13BQ3SXY8 428 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 PLEKHA7Q6IQ23 1121 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 MARVELD2Q8N4S9 558 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 PDZD8Q8NEN9 1154 aa15.71■□□□□ 0.11
VLDLR-202ENST00000382099 EMSYQ7Z589 1322 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 GGPS1O95749 300 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 ATXN3P54252 364 aaPredicted RBP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 ZNF568Q3ZCX4 644 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 KRT79Q5XKE5 535 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 SLC43A3Q8NBI5 491 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 ITPKCQ96DU7 683 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 PLA2G12BQ9BX93 195 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 DDX56Q9NY93 547 aaKnown RBP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 MYH3P11055 1940 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 CCDC195A0A1B0GUA6 201 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 GIPC1O14908 333 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 FTLP02792 175 aaPredicted RBP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 ZNF12P17014 697 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 CDK9P50750 372 aaKnown RBP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 XIAPP98170 497 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 DRAP1Q14919 205 aaPredicted RBP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 COBLL1Q53SF7 1204 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 RHBDF2Q6PJF5 856 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 KCNK18Q7Z418 384 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 ANKMY2Q8IV38 441 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 ZBTB38Q8NAP3 1195 aaPredicted RBP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 BHMTQ93088 406 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 FERMT1Q9BQL6 677 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 KCNK13Q9HB14 408 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 SENP1Q9P0U3 644 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 CHD4Q14839 1912 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 CASQ2O14958 399 aaPredicted RBP15.7■□□□□ 0.1
VLDLR-202ENST00000382099 CHEK2O96017 543 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 KCNA2P16389 499 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 GNA11P29992 359 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 BCAMP50895 628 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 RNF19BQ6ZMZ0 732 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 FAM111AQ96PZ2 611 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 HGH1Q9BTY7 390 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 CNGB3Q9NQW8 809 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 SYNPO2Q9UMS6 1093 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 SOX13Q9UN79 622 aa15.7■□□□□ 0.1
VLDLR-202ENST00000382099 EP400Q96L91 3159 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 ERVV-2B6SEH9 535 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 LAD1O00515 517 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 PFDN6O15212 129 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 TP73O15350 636 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 AP1G1O43747 822 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 GMNNO75496 209 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 CCDC130P13994 396 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 ADAM17P78536 824 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 SNAPC2Q13487 334 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 FASTKD3Q14CZ7 662 aaKnown RBP15.69■□□□□ 0.1
VLDLR-202ENST00000382099 C11orf74Q86VG3 221 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 CAPSLQ8WWF8 208 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 EBF1Q9UH73 591 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 GNEQ9Y223 722 aaKnown RBP15.69■□□□□ 0.1
VLDLR-202ENST00000382099 TNS2Q63HR2 1409 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 TMX2-CTNND1H3BSU7 103 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 UGT1A9O60656 530 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 ZC3H11AO75152 810 aaKnown RBP eCLIP15.69■□□□□ 0.1
VLDLR-202ENST00000382099 ENO2P09104 434 aaPredicted RBP15.69■□□□□ 0.1
VLDLR-202ENST00000382099 PIM1P11309 404 aaPredicted RBP15.69■□□□□ 0.1
VLDLR-202ENST00000382099 UGT1A6P19224 532 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 UGT1A1P22309 533 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 UGT1A4P22310 534 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 UGT1A3P35503 534 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 UGT1A5P35504 534 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 GJC1P36383 396 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 RGS21Q2M5E4 152 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 NIPAL1Q6NVV3 410 aa15.69■□□□□ 0.1
VLDLR-202ENST00000382099 AHI1Q8N157 1196 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms