RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 SAYSD1Q9NPB0 183 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 HAUS2Q9NVX0 235 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.3□□□□□ -0.28
PUDP-201ENST00000381077 ARL2BPQ9Y2Y0 163 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 RASA4BC9J798 803 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 PI4K2BG5E9Z4 385 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 DNM1LO00429 736 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 RASA4O43374 803 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 GJB6O95452 261 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 CD19P15391 556 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 PECAM1P16284 738 aaPredicted RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 STX2P32856 288 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 RFC1P35251 1148 aaPredicted RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 SNX16P57768 344 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 CCDC15Q0P6D6 951 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 MYO1EQ12965 1108 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 PRKG1Q13976 671 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 ZNF394Q53GI3 561 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 SLC4A11Q8NBS3 891 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 C9orf72Q96LT7 481 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 ELAC2Q9BQ52 826 aaKnown RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 FHDC1Q9C0D6 1143 aaPredicted RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 IFT122Q9HBG6 1241 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 KCNK9Q9NPC2 374 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 KLC4Q9NSK0 619 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 DERAQ9Y315 318 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 ZNF487B1APH4 448 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 SGK1O00141 431 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 ENDOD1O94919 500 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 STAG3L1P0CL83 205 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 SETSIPP0DME0 302 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 CXCL8P10145 99 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 SKIV2L2P42285 1042 aaKnown RBP13.29□□□□□ -0.28
PUDP-201ENST00000381077 ARL4CP56559 192 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 HIF1AQ16665 826 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 AMHR2Q16671 573 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 KLHL38Q2WGJ6 581 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 CCDC38Q502W7 563 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 FAM47CQ5HY64 1035 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 EFHC2Q5JST6 749 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 FBXW10Q5XX13 1052 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 EEF1DP3Q658K8 133 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 RNF43Q68DV7 783 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 EEPD1Q7L9B9 569 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 TRIM50Q86XT4 487 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 ATP11CQ8NB49 1132 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 PPTC7Q8NI37 304 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 ALKBH8Q96BT7 664 aaKnown RBP13.29□□□□□ -0.28
PUDP-201ENST00000381077 ELP3Q9H9T3 547 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 SLC40A1Q9NP59 571 aa13.29□□□□□ -0.28
PUDP-201ENST00000381077 PSMC3IPQ9P2W1 217 aaPredicted RBP13.29□□□□□ -0.28
PUDP-201ENST00000381077 NXF1Q9UBU9 619 aaKnown RBP13.29□□□□□ -0.28
PUDP-201ENST00000381077 BARX2Q9UMQ3 279 aaPredicted RBP13.29□□□□□ -0.28
PUDP-201ENST00000381077 TCP11X1B4DZS4 312 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 SPAG6O75602 509 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 GH1P01241 217 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 TCF4P15884 667 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 DESP17661 470 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 ZNF143P52747 638 aaPredicted RBP13.28□□□□□ -0.28
PUDP-201ENST00000381077 CDC42EP1Q00587 391 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 MOGSQ13724 837 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 TFDP2Q14188 446 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 PCBP1Q15365 356 aaKnown RBP eCLIP13.28□□□□□ -0.28
PUDP-201ENST00000381077 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 FUKQ8N0W3 1084 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 NAT8LQ8N9F0 302 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 SYNCQ9H7C4 482 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 ZMYND8Q9ULU4 1186 aaPredicted RBP13.28□□□□□ -0.28
PUDP-201ENST00000381077 SLC45A1Q9Y2W3 748 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 A0A1B0GUA9 196 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 LACTBL1A8MY62 500 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 GPR25O00155 361 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 CHUKO15111 745 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 TOMM70O94826 608 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 KRT19P08727 400 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 ATP2A2P16615 1042 aaKnown RBP13.28□□□□□ -0.28
PUDP-201ENST00000381077 SSTR3P32745 418 aaPredicted RBP13.28□□□□□ -0.28
PUDP-201ENST00000381077 GPD2P43304 727 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 IFNAR2P48551 515 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 CCNA1P78396 465 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 RBP5P82980 135 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 OTUD4Q01804 1114 aaKnown RBP13.28□□□□□ -0.28
PUDP-201ENST00000381077 ARHGAP1Q07960 439 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 SPARCL1Q14515 664 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 MTFR1Q15390 333 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 SPDYAQ5MJ70 313 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 CYP4A22Q5TCH4 519 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 NUGGCQ68CJ6 796 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 LCLAT1Q6UWP7 414 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 SCARA5Q6ZMJ2 495 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 SPATA21Q7Z572 469 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 ZNF410Q86VK4 478 aa13.28□□□□□ -0.28
PUDP-201ENST00000381077 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms