RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 SPATA2LQ8IUW3 424 aaPredicted RBP21.26■□□□□ 0.99
CDPF1-202ENST00000381037 PPM1KQ8N3J5 372 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 C12orf29Q8N999 325 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 NECTIN4Q96NY8 510 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 B3GNT5Q9BYG0 378 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 POMKQ9H5K3 350 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 WDR6Q9NNW5 1121 aaKnown RBP21.26■□□□□ 0.99
CDPF1-202ENST00000381037 DNMT3BQ9UBC3 853 aaKnown RBP21.26■□□□□ 0.99
CDPF1-202ENST00000381037 XYLBO75191 536 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 MAGEA11P43364 429 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 RAD23BP54727 409 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 MGAT5BQ3V5L5 792 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 LRSAM1Q6UWE0 723 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 LUZP1Q86V48 1076 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 FUKQ8N0W3 1084 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 TMEM30AQ9NV96 361 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 HCFC1R1Q9NWW0 138 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 FAM50BQ9Y247 325 aa21.26■□□□□ 0.99
CDPF1-202ENST00000381037 TTC28Q96AY4 2481 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
CDPF1-202ENST00000381037 TJAP1Q5JTD0 557 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 VSTM1Q6UX27 236 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 GRASPQ7Z6J2 395 aaPredicted RBP21.25■□□□□ 0.99
CDPF1-202ENST00000381037 SLC4A11Q8NBS3 891 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 FAM200AQ8TCP9 573 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 JAKMIP2Q96AA8 810 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 SEPT5Q99719 369 aaPredicted RBP21.25■□□□□ 0.99
CDPF1-202ENST00000381037 LRRC3Q9BY71 257 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 APEX2Q9UBZ4 518 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 CNTN6Q9UQ52 1028 aa21.25■□□□□ 0.99
CDPF1-202ENST00000381037 MUC3AQ02505 3323 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 DOCK6Q96HP0 2047 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 BECN2A8MW95 431 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 BDNFP23560 247 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 ALDH1A3P47895 512 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 CYP27A1Q02318 531 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 PLD1Q13393 1074 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 ZNF394Q53GI3 561 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 GJB7Q6PEY0 223 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 TMEM176AQ96HP8 235 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 ZNF518BQ9C0D4 1074 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 PIDD1Q9HB75 910 aa21.24■□□□□ 0.99
CDPF1-202ENST00000381037 UBE2TQ9NPD8 197 aaPredicted RBP21.24■□□□□ 0.99
CDPF1-202ENST00000381037 AVENQ9NQS1 362 aaPredicted RBP21.24■□□□□ 0.99
CDPF1-202ENST00000381037 NOTCH4Q99466 2003 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 LGALS16A8MUM7 142 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 CLDN5O00501 218 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 PTPN2P17706 415 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 GPR15P49685 360 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 CACNA2D1P54289 1103 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 EPHA5P54756 1037 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 ZNF445P59923 1031 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 NTHL1P78549 312 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 DDR2Q16832 855 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 ANKRD20A12PQ8NF67 263 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 PSMG2Q969U7 264 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 PHF7Q9BWX1 381 aaPredicted RBP21.23■□□□□ 0.99
CDPF1-202ENST00000381037 ASB3Q9Y575 518 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 PTPRDP23468 1912 aa21.23■□□□□ 0.99
CDPF1-202ENST00000381037 RNF225M0QZC1 329 aaPredicted RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 CCDC130P13994 396 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 ZNF132P52740 706 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 EPHB3P54753 998 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 YWHAEP62258 255 aaKnown RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 ENOSF1Q7L5Y1 443 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 DNAJB7Q7Z6W7 309 aaPredicted RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 HNRNPABQ99729 332 aaKnown RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 PRKAG3Q9UGI9 489 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 CLUHO75153 1309 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 DENND4AQ7Z401 1863 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 PES1O00541 588 aaKnown RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 RPL10AP62906 217 aaKnown RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 FAM35AQ86V20 835 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 TMC8Q8IU68 726 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 SLC2A14Q8TDB8 520 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 CYFIP2Q96F07 1278 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 ZNF512Q96ME7 567 aaPredicted RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 FAM49BQ9NUQ9 324 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 AJAP1Q9UKB5 411 aaPredicted RBP21.22■□□□□ 0.99
CDPF1-202ENST00000381037 SIK3Q9Y2K2 1263 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 BDP1A6H8Y1 2624 aa21.22■□□□□ 0.99
CDPF1-202ENST00000381037 NRG2O14511 850 aaPredicted RBP21.21■□□□□ 0.99
CDPF1-202ENST00000381037 NCOR1O75376 2440 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 RHOP08100 348 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 HMGA1P17096 107 aaKnown RBP21.21■□□□□ 0.99
CDPF1-202ENST00000381037 ZP2Q05996 745 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 KLHDC7AQ5VTJ3 777 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 SMYD5Q6GMV2 418 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 TMEM270Q6UE05 265 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 HS6ST3Q8IZP7 471 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 GPR152Q8TDT2 470 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 C8orf48Q96LL4 319 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 FAM81BQ96LP2 452 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 CEP295NLQ96MC4 621 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 CORO1BQ9BR76 489 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 NAA15Q9BXJ9 866 aaKnown RBP21.21■□□□□ 0.99
CDPF1-202ENST00000381037 TSPY26PQ9H489 355 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 CSNK1G1Q9HCP0 422 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 PLCB1Q9NQ66 1216 aa21.21■□□□□ 0.99
CDPF1-202ENST00000381037 C19orf67A6NJJ6 358 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms