RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MKNK1Q9BUB5 465 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 WDR6Q9NNW5 1121 aaKnown RBP9.89□□□□□ -0.83
HMGN1-202ENST00000380747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.89□□□□□ -0.831e-9■■■■■ 62.2
HMGN1-202ENST00000380747 HCFC1R1Q9NWW0 138 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 SORCS3Q9UPU3 1222 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 INSL5Q9Y5Q6 135 aa9.89□□□□□ -0.83
HMGN1-202ENST00000380747 MTMR11A4FU01 709 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 C2CD4DB7Z1M9 353 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 SLC16A3O15427 465 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 HCRTO43612 131 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 STX10O60499 249 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 VNN2O95498 520 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 STAU1O95793 577 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 PDGFBP01127 241 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 HLA-DRAP01903 254 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 PDGFRBP09619 1106 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 WARSP23381 471 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 FSHRP23945 695 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 PCSK1P29120 753 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 GBP2P32456 591 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 LHX1P48742 406 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 DUSP4Q13115 394 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 MTMR3Q13615 1198 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 SGSM1Q2NKQ1 1148 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 CCDC40Q4G0X9 1142 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 TTI2Q6NXR4 508 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 SCARA5Q6ZMJ2 495 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 RTL10Q7L3V2 364 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 GET4Q7L5D6 327 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 DPH6Q7L8W6 267 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 OTOP3Q7RTS5 596 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 LRRTM3Q86VH5 581 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 ZC3H3Q8IXZ2 948 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 ELMOD1Q8N336 334 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 OR6B3Q8NGW1 331 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 SPATA18Q8TC71 538 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 GPT2Q8TD30 523 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 KBTBD7Q8WVZ9 684 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 ACSF2Q96CM8 615 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 CEP63Q96MT8 703 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 SEPT5Q99719 369 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 DUSP9Q99956 384 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 ACBD6Q9BR61 282 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 MRPL45Q9BRJ2 306 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 RHOBTB2Q9BYZ6 727 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 XYLT2Q9H1B5 865 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 CRISPLD1Q9H336 500 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 SNX25Q9H3E2 840 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 ABI2Q9NYB9 513 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 DNMT3BQ9UBC3 853 aaKnown RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 ARMCX3Q9UH62 379 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-202ENST00000380747 MAFFQ9ULX9 164 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 YIPF1Q9Y548 306 aa9.88□□□□□ -0.83
HMGN1-202ENST00000380747 SCN1AP35498 2009 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 GABRDO14764 452 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 SOAT2O75908 522 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 PAPLNO95428 1278 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 POU2F2P09086 479 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 P4HA1P13674 534 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 GTF2H1P32780 548 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 GNL1P36915 607 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 RAP1GAPP47736 663 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 ALDH1A3P47895 512 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 CLCN5P51795 746 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 PSMC1P62191 440 aaKnown RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 ENPEPQ07075 957 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 PLD1Q13393 1074 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 MGAT5BQ3V5L5 792 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 PABPC1LQ4VXU2 614 aaKnown RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 SPOPLQ6IQ16 392 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 FILIP1Q7Z7B0 1213 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 TTC9BQ8N6N2 239 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 TMEM105Q8N8V8 129 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 MLKLQ8NB16 471 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 CCDC150Q8NCX0 1101 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 FAM200AQ8TCP9 573 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 C2orf15Q8WU43 125 aaKnown RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 TSC1Q92574 1164 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 TAF4BQ92750 862 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 NKD2Q969F2 451 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 KCTD12Q96CX2 325 aaKnown RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 ZNF512Q96ME7 567 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 SYT15Q9BQS2 421 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 CORO1BQ9BR76 489 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 PI4K2AQ9BTU6 479 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 SRRTQ9BXP5 876 aaKnown RBP9.87□□□□□ -0.83
HMGN1-202ENST00000380747 IMPG2Q9BZV3 1241 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 SMYD3Q9H7B4 428 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 TMEM8AQ9HCN3 771 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 TMLHEQ9NVH6 421 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 RWDD2AQ9UIY3 292 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 GTF3C4Q9UKN8 822 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 CDH9Q9ULB4 789 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 PCDHB5Q9Y5E4 795 aa9.87□□□□□ -0.83
HMGN1-202ENST00000380747 TSC2P49815 1807 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 CEP250Q9BV73 2442 aa9.86□□□□□ -0.83
HMGN1-202ENST00000380747 MYBPHLA2RUH7 354 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms