RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 GLRA4Q5JXX5 417 aa20.26■□□□□ 0.83
PCDHA4-201ENST00000378125 LRRC38Q5VT99 294 aa20.26■□□□□ 0.83
PCDHA4-201ENST00000378125 PTPN18Q99952 460 aa20.26■□□□□ 0.83
PCDHA4-201ENST00000378125 ADPGKQ9BRR6 497 aa20.26■□□□□ 0.83
PCDHA4-201ENST00000378125 FAM129AQ9BZQ8 928 aa20.26■□□□□ 0.83
PCDHA4-201ENST00000378125 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.26■□□□□ 0.83
PCDHA4-201ENST00000378125 A0A1B0GUA9 196 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 SGK1O00141 431 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 DYNC1LI2O43237 492 aaPredicted RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 CYP3A5P20815 502 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 MMP13P45452 471 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 RGS7P49802 495 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 ADCY1Q08828 1119 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 GPR162Q16538 588 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 DUSP28Q4G0W2 176 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 FAM102AQ5T9C2 384 aaPredicted RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 CAPN12Q6ZSI9 719 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 IFNLR1Q8IU57 520 aaPredicted RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 MGARPQ8TDB4 240 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 GTF3C2Q8WUA4 911 aaPredicted RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 EMID1Q96A84 441 aaPredicted RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 PIWIL1Q96J94 861 aaKnown RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 TINF2Q9BSI4 451 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 CNOT10Q9H9A5 744 aaKnown RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 C3orf70A6NLC5 250 aaPredicted RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 GPD2P43304 727 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 IFNAR2P48551 515 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 EXOC3L1Q86VI1 746 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 NIPA2Q8N8Q9 360 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 XPO6Q96QU8 1125 aaKnown RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 RBM15Q96T37 977 aaKnown RBP eCLIP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 APOL6Q9BWW8 343 aa20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 EIF2AQ9BY44 585 aaKnown RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 DDX56Q9NY93 547 aaKnown RBP20.25■□□□□ 0.83
PCDHA4-201ENST00000378125 IQCA1LA6NCM1 817 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 GOLGA8MH3BSY2 632 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 CST8O60676 142 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 ATICP31939 592 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 RBP5P82980 135 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 CAV1Q03135 178 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 DGKDQ16760 1214 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 HIBCHQ6NVY1 386 aaPredicted RBP20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 ALLCQ8N6M5 410 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 OSMRQ99650 979 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 PRMT1Q99873 361 aaKnown RBP20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 LPIN3Q9BQK8 851 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 TMEM109Q9BVC6 243 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 P4HA1P13674 534 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 LIG3P49916 1009 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 CDR1P51861 262 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 LRRC14Q15048 493 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 CDO1Q16878 200 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 MLXIPLQ9NP71 852 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 TSPAN16Q9UKR8 245 aa20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.24■□□□□ 0.83
PCDHA4-201ENST00000378125 KAT6AQ92794 2004 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 COL1A2P08123 1366 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 MIPP30301 263 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 GCLCP48506 637 aaPredicted RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 VCPP55072 806 aaKnown RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 GDF10P55107 478 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 OTUD4Q01804 1114 aaKnown RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 IFT88Q13099 833 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 MTM1Q13496 603 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 GRB14Q14449 540 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 ERMARDQ5T6L9 678 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 OR6B2Q6IFH4 312 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 CPLX4Q7Z7G2 160 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 PNMA8AQ86V59 439 aaPredicted RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 CYP4X1Q8N118 509 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 KCTD6Q8NC69 237 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 ACTL9Q8TC94 416 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 C18orf25Q96B23 403 aaPredicted RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 MRPL45Q9BRJ2 306 aaKnown RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 SAYSD1Q9NPB0 183 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 FAM49BQ9NUQ9 324 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 MORF4L1Q9UBU8 362 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 DDX20Q9UHI6 824 aaKnown RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 CPA4Q9UI42 421 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 BARX2Q9UMQ3 279 aaPredicted RBP20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 SNX9Q9Y5X1 595 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 TRIP11Q15643 1979 aa20.23■□□□□ 0.83
PCDHA4-201ENST00000378125 E5RJQ4 531 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 VDRP11473 427 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 KDELR1P24390 212 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 COPS2P61201 443 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 LMNB2Q03252 620 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 FASTKD3Q14CZ7 662 aaKnown RBP20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 HADHQ16836 314 aaKnown RBP20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 C15orf59Q2T9L4 293 aaPredicted RBP20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 RNF187Q5TA31 235 aaPredicted RBP20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 PLEKHH3Q7Z736 793 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 ARHGEF2Q92974 986 aaKnown RBP20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 CALN1Q9BXU9 219 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 ABHD16BQ9H3Z7 469 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 CYP3A43Q9HB55 503 aa20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 INTS9Q9NV88 658 aaKnown RBP20.22■□□□□ 0.83
PCDHA4-201ENST00000378125 TUBGCP4Q9UGJ1 667 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms