RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 EFTUD2Q15029 972 aaKnown RBP eCLIP11.5□□□□□ -0.57
BEST1-201ENST00000378043 TAZQ16635 292 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 FNBP1LQ5T0N5 605 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 RGS9BPQ6ZS82 235 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 CENPUQ71F23 418 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 EMC1Q8N766 993 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 GRAMD1AQ96CP6 724 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 ZWILCHQ9H900 591 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 STARD13Q9Y3M8 1113 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 L3MBTL1Q9Y468 752 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
BEST1-201ENST00000378043 IGKV6-21A0A0C4DH24 114 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 B4GALT5O43286 388 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 CST8O60676 142 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 ARIH2O95376 493 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 KRT3P12035 628 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 PSMA2P25787 234 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 SSTR1P30872 391 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 CTCFP49711 727 aaPredicted RBP11.49□□□□□ -0.57
BEST1-201ENST00000378043 CDH8P55286 799 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 OSTNP61366 133 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 TRPC3Q13507 836 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 RASA2Q15283 850 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 MAPK6Q16659 721 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 HIF1AQ16665 826 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 HSDL1Q3SXM5 330 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 IER5Q5VY09 327 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 METTL7BQ6UX53 244 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 TMEM192Q8IY95 271 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 THNSL1Q8IYQ7 743 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 NAT8LQ8N9F0 302 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 CPXM1Q96SM3 734 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 NXF1Q9UBU9 619 aaKnown RBP11.49□□□□□ -0.57
BEST1-201ENST00000378043 PHTF1Q9UMS5 762 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 EFR3BQ9Y2G0 817 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 TCRBV7S3A2A0A539 114 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 KDELR1P24390 212 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 RPL22P35268 128 aaKnown RBP11.49□□□□□ -0.57
BEST1-201ENST00000378043 CCDC15Q0P6D6 951 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 ORC1Q13415 861 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 MTM1Q13496 603 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 TFDP1Q14186 410 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 SPARCL1Q14515 664 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 TAF5Q15542 800 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 PDK4Q16654 411 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 NOL9Q5SY16 702 aaKnown RBP11.49□□□□□ -0.57
BEST1-201ENST00000378043 FAM160B1Q5W0V3 765 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 EEF1DP3Q658K8 133 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 BBS12Q6ZW61 710 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 AGAP11Q8TF27 550 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 ZBTB10Q96DT7 871 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 SDCBP2Q9H190 292 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 LHX5Q9H2C1 402 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 SIX4Q9UIU6 781 aa11.49□□□□□ -0.57
BEST1-201ENST00000378043 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
BEST1-201ENST00000378043 B4GALT4O60513 344 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 UNC5CO95185 931 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 CA4P22748 312 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 RAD23BP54727 409 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 NRLP54845 237 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 LACTBP83111 547 aaPredicted RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 NEDD9Q14511 834 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 DLK2Q6UY11 383 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 TSHZ1Q6ZSZ6 1077 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 APOBEC3FQ8IUX4 373 aaKnown RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 UNC45BQ8IWX7 931 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 TAB3Q8N5C8 712 aaPredicted RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
BEST1-201ENST00000378043 SLC16A10Q8TF71 515 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 CNKSR2Q8WXI2 1034 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 UTP4Q969X6 686 aaKnown RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 STAMBPL1Q96FJ0 436 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 TWNKQ96RR1 684 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 SMC6Q96SB8 1091 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 SENP1Q9P0U3 644 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 STRIP2Q9ULQ0 834 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 SMG5Q9UPR3 1016 aaKnown RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 AGTPBP1Q9UPW5 1226 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 CHKBQ9Y259 395 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 CENPFP49454 3210 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 EDF1O60869 148 aaKnown RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 TMEM63AO94886 807 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 ERBB2P04626 1255 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 IQCF3P0C7M6 154 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 TGFB3P10600 412 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 CD19P15391 556 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 KRT4P19013 534 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 YARSP54577 528 aaKnown RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 YWHAEP62258 255 aaKnown RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
BEST1-201ENST00000378043 MPZL3Q6UWV2 235 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 XYLT1Q86Y38 959 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 RIOX2Q8IUF8 465 aa11.48□□□□□ -0.57
BEST1-201ENST00000378043 ZNF276Q8N554 614 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms