RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 A0A1W2PQ45 241 aaPredicted RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 A0A1W2PQY0 241 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 F8VP50 259 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 CLGNO14967 610 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 INHBAP08476 426 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 RPL17P18621 184 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 PHBP35232 272 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 CDR2Q01850 454 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 PWP2Q15269 919 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 PSMD5Q16401 504 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 PCSK7Q16549 785 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 USP41Q3LFD5 358 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 RAD9BQ6WBX8 426 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 VPS52Q8N1B4 723 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 TC2NQ8N9U0 490 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 IRAK4Q9NWZ3 460 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 CWC15Q9P013 229 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 MYH13Q9UKX3 1938 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 RGS16O15492 202 aaPredicted RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 XYLBO75191 536 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 LYPLA2O95372 231 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 USP17L7P0C7H9 530 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 COMTP21964 271 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 NFKBIAP25963 317 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 YWHAQP27348 245 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 CALRP27797 417 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 SERPINB6P35237 376 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 TUFMP49411 452 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 PURAQ00577 322 aaKnown RBP8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 TUSC3Q13454 348 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 DDR2Q16832 855 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 CCDC157Q569K6 752 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 C12orf29Q8N999 325 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 TTC1Q99614 292 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 SPG21Q9NZD8 308 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 TUBGCP4Q9UGJ1 667 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 GTF2IRD1Q9UHL9 959 aa8.88□□□□□ -0.99
CRNKL1-202ENST00000377340 KLRC4O43908 158 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ASMTLO95671 621 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 FPGSQ05932 587 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 DUSP4Q13115 394 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 SDE2Q6IQ49 451 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ZNF467Q7Z7K2 595 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 CARNMT1Q8N4J0 409 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 FEZF2Q8TBJ5 459 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 RAB3IL1Q8TBN0 382 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 KLC2Q9H0B6 622 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 PFDN4Q9NQP4 134 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 FBXL21Q9UKT6 434 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 KIAA1257Q9ULG3 409 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ALG6Q9Y672 507 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 CDY1Q9Y6F8 540 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 F5P12259 2224 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ESYT3A0FGR9 886 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 DYNC1I1O14576 645 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 KIF3CO14782 793 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 OPLAHO14841 1288 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ADH1AP07327 375 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GSTA1P08263 222 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GSTA2P09210 222 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 PTPN1P18031 435 aaKnown RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GGCXP38435 758 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 IFNAR2P48551 515 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 SARSP49591 514 aaKnown RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 EIF3EP60228 445 aaKnown RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 TAP1Q03518 808 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ZNF177Q13360 481 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 MYBPC2Q14324 1141 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 NAB2Q15742 525 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ZNF449Q6P9G9 518 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ITIH5Q86UX2 942 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ELOA2Q8IYF1 753 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 TTC13Q8NBP0 860 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 AFAP1L1Q8TED9 768 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 LENG9Q96B70 501 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 SSU72P8A0A1W2PR75 194 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 CCDC66A2RUB6 948 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 F8VZ95 297 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 CLDN5O00501 218 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 APOL1O14791 398 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 TGFB1I1O43294 461 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 CST8O60676 142 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GJB6O95452 261 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 C22orf31O95567 290 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ACSL3O95573 720 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 CSF2RAP15509 400 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GTF2F1P35269 517 aaKnown RBP eCLIP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 SESN2P58004 480 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GPS1Q13098 491 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 TSHZ1Q6ZSZ6 1077 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 TPGS1Q6ZTW0 290 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 TFAP2DQ7Z6R9 452 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 PCGF5Q86SE9 256 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 LRRC43Q8N309 656 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 BBOF1Q8ND07 529 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 RXFP2Q8WXD0 754 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms