RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 NF2P35240 595 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 DUOXA2Q1HG44 320 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 ATF7IP2Q5U623 682 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 MICALCLQ6ZW33 695 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 ZBTB33Q86T24 672 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 FBXO16Q8IX29 292 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 CACNA2D3Q8IZS8 1091 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 CCDC89Q8N998 374 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 TCP11Q8WWU5 503 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 ARHGEF2Q92974 986 aaKnown RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 C16orf70Q9BSU1 422 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 PDGFCQ9NRA1 345 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 NRBP2Q9NSY0 501 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 DDX56Q9NY93 547 aaKnown RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 CTDP1Q9Y5B0 961 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 TMEM63AO94886 807 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 MAGEA4P43358 317 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 MAGEA6P43360 314 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 SLC26A2P50443 739 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 CCDC15Q0P6D6 951 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 GKAP1Q5VSY0 366 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 JADE1Q6IE81 842 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 BNIPLQ7Z465 357 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 FAF2Q96CS3 445 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 RMDN2Q96LZ7 410 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 PLVAPQ9BX97 442 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 C2orf40Q9H1Z8 148 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 FAM124BQ9H5Z6 455 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 INTS9Q9NV88 658 aaKnown RBP10.11□□□□□ -0.79
TRIM39-202ENST00000376659 ASIC3Q9UHC3 531 aa10.11□□□□□ -0.79
TRIM39-202ENST00000376659 DPYSL4O14531 572 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 ADCY6O43306 1168 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 BANF1O75531 89 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 SLC25A27O95847 323 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 IGHA2P01877 340 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 KDELR1P24390 212 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 NCALDP61601 193 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 CALCOCO2Q13137 446 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 PPIL2Q13356 520 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 KCNJ11Q14654 390 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 SLC10A6Q3KNW5 377 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 WLSQ5T9L3 541 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 DCAKDQ8WVC6 231 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 MAGEB18Q96M61 343 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 FRMD8P1Q9BZ68 369 aaPredicted RBP10.1□□□□□ -0.79
TRIM39-202ENST00000376659 DNAJC17Q9NVM6 304 aaKnown RBP10.1□□□□□ -0.79
TRIM39-202ENST00000376659 COL1A2P08123 1366 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 IL18RAPO95256 599 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 GAS8O95995 478 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 KRT1P04264 644 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 MAGEA3P43357 314 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 BNIP1Q12981 228 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 STAT4Q14765 748 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 C7orf31Q8N865 590 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 RBM15Q96T37 977 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRIM39-202ENST00000376659 TRIP12Q14669 1992 aaPredicted RBP10.1□□□□□ -0.79
TRIM39-202ENST00000376659 PLXNA3P51805 1871 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 LACTBL1A8MY62 500 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 CXCL11O14625 94 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 MICAL2O94851 1124 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 TRUB2O95900 331 aaKnown RBP10.1□□□□□ -0.79
TRIM39-202ENST00000376659 EFTUD2Q15029 972 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRIM39-202ENST00000376659 MTFR1Q15390 333 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 ZBTB6Q15916 424 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 ZNF699Q32M78 642 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 OTUD6BQ8N6M0 293 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 BBOF1Q8ND07 529 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
TRIM39-202ENST00000376659 TPX2Q9ULW0 747 aaKnown RBP10.1□□□□□ -0.79
TRIM39-202ENST00000376659 CDH16O75309 829 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 NPTXRO95502 500 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 ELF3P78545 371 aaPredicted RBP10.09□□□□□ -0.79
TRIM39-202ENST00000376659 SURF1Q15526 300 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 IGDCC3Q8IVU1 814 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 TMEM35BQ8NCS4 154 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 SHCBP1Q8NEM2 672 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 CCHCR1Q8TD31 782 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 TMEM121Q9BTD3 319 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 KIF9Q9HAQ2 790 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 HAUS2Q9NVX0 235 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 SAE1Q9UBE0 346 aaPredicted RBP10.09□□□□□ -0.79
TRIM39-202ENST00000376659 SMIM23A6NLE4 172 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 C2CD4BA6NLJ0 364 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 TSPAN1O60635 241 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 TJP3O95049 919 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 MCF2P10911 925 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 ADCY8P40145 1251 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 CLCN3P51790 818 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 MAPK6Q16659 721 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 SH3PXD2AQ5TCZ1 1133 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 DNAJC24Q6P3W2 148 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 OLFML1Q6UWY5 402 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 TAOK1Q7L7X3 1001 aa10.09□□□□□ -0.79
TRIM39-202ENST00000376659 CCDC197Q8NCU1 140 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms