RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 GPR17Q13304 367 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 C10orf76Q5T2E6 689 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 ALKBH5Q6P6C2 394 aaKnown RBP24.3■■□□□ 1.48
HLA-C-202ENST00000376237 LRRTM3Q86VH5 581 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 OLIG1Q8TAK6 271 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 POF1BQ8WVV4 589 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 FUBP3Q96I24 572 aaKnown RBP eCLIP24.3■■□□□ 1.48
HLA-C-202ENST00000376237 TMEM209Q96SK2 561 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 LUC7LQ9NQ29 371 aaKnown RBP24.3■■□□□ 1.48
HLA-C-202ENST00000376237 MTUS1Q9ULD2 1270 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 IRAK3Q9Y616 596 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 CDY1Q9Y6F8 540 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 VWA8A3KMH1 1905 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 H3BNC9 293 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 LILRB3O75022 631 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 CPB1P15086 417 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 DNAJB2P25686 324 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 KRT83P78385 493 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 CYP27A1Q02318 531 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 GFPT1Q06210 699 aaPredicted RBP24.29■■□□□ 1.48
HLA-C-202ENST00000376237 MTF1Q14872 753 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 GOLGA7BQ2TAP0 167 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 PDE12Q6L8Q7 609 aaKnown RBP24.29■■□□□ 1.48
HLA-C-202ENST00000376237 SPATA2LQ8IUW3 424 aaPredicted RBP24.29■■□□□ 1.48
HLA-C-202ENST00000376237 C2orf15Q8WU43 125 aaKnown RBP24.29■■□□□ 1.48
HLA-C-202ENST00000376237 PCDHB18PQ96TA0 734 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 LPIN3Q9BQK8 851 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 MED10Q9BTT4 135 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 B3GNT5Q9BYG0 378 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 RXFP1Q9HBX9 757 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 NGRNQ9NPE2 291 aaKnown RBP24.29■■□□□ 1.48
HLA-C-202ENST00000376237 TLR9Q9NR96 1032 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 SPTLC3Q9NUV7 552 aa24.29■■□□□ 1.48
HLA-C-202ENST00000376237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.29■■□□□ 1.48
HLA-C-202ENST00000376237 PDE4DIPQ5VU43 2346 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 M0QYV0 167 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 SETSIPP0DME0 302 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 UNGP13051 313 aaPredicted RBP24.28■■□□□ 1.48
HLA-C-202ENST00000376237 ADORA2BP29275 332 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 BCAT1P54687 386 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 PTPN14Q15678 1187 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 CLEC16AQ2KHT3 1053 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 CFAP221Q4G0U5 840 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 SLC39A12Q504Y0 691 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 PKDCCQ504Y2 493 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 CCDC122Q5T0U0 273 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 RSPO2Q6UXX9 243 aaPredicted RBP24.28■■□□□ 1.48
HLA-C-202ENST00000376237 MYLPFQ96A32 169 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 TCF25Q9BQ70 676 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 CLSTN3Q9BQT9 956 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 DUSP16Q9BY84 665 aa24.28■■□□□ 1.48
HLA-C-202ENST00000376237 RTN2O75298 545 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 CXCL14O95715 111 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 CFHP08603 1231 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 OR1D2P34982 312 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 NOMO3P69849 1222 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 BST2Q10589 180 aaKnown RBP24.27■■□□□ 1.48
HLA-C-202ENST00000376237 GPM6BQ13491 265 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 PAQR9Q6ZVX9 377 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 SPRED2Q7Z698 418 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 FAM35AQ86V20 835 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 TIFAQ96CG3 184 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 SMARCD1Q96GM5 515 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 NOX5Q96PH1 765 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 ABCB6Q9NP58 842 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 ENTPD7Q9NQZ7 604 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 TMLHEQ9NVH6 421 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 NENFQ9UMX5 172 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 PCDHB5Q9Y5E4 795 aa24.27■■□□□ 1.48
HLA-C-202ENST00000376237 OR4Q2P0C623 313 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 FAM200BP0CF97 657 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 GPD2P43304 727 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 NDUFV1P49821 464 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 CENPCQ03188 943 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 SMC1AQ14683 1233 aaKnown RBP24.26■■□□□ 1.47
HLA-C-202ENST00000376237 LRIT3Q3SXY7 679 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 ACAD10Q6JQN1 1059 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 DENND1BQ6P3S1 775 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 TTC30AQ86WT1 665 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 PALB2Q86YC2 1186 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 PASD1Q8IV76 773 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 SPPL2BQ8TCT7 592 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 LMAN2LQ9H0V9 348 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 ISCUQ9H1K1 167 aa24.26■■□□□ 1.47
HLA-C-202ENST00000376237 TNRC18O15417 2968 aaPredicted RBP24.26■■□□□ 1.47
HLA-C-202ENST00000376237 CLDN5O00501 218 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 LPXNO60711 386 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 NPR3P17342 541 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 SSTR3P32745 418 aaPredicted RBP24.25■■□□□ 1.47
HLA-C-202ENST00000376237 NSFP46459 744 aaKnown RBP24.25■■□□□ 1.47
HLA-C-202ENST00000376237 ARPP19P56211 112 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 ERVFC1P60507 584 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 ROR1Q01973 937 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 RAB33AQ14088 237 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 CCDC142Q17RM4 750 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 TPGS2Q68CL5 300 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 TXLNBQ8N3L3 684 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 MRPL43Q8N983 215 aaKnown RBP24.25■■□□□ 1.47
HLA-C-202ENST00000376237 ZNF461Q8TAF7 563 aa24.25■■□□□ 1.47
HLA-C-202ENST00000376237 UBA3Q8TBC4 463 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms