RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 KLC2Q9H0B6 622 aa11.12□□□□□ -0.63
ZNF549-202ENST00000376233 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
ZNF549-202ENST00000376233 ZNF214Q9UL59 606 aaPredicted RBP11.12□□□□□ -0.63
ZNF549-202ENST00000376233 MAST2Q6P0Q8 1798 aa11.12□□□□□ -0.63
ZNF549-202ENST00000376233 MYPNQ86TC9 1320 aa11.12□□□□□ -0.63
ZNF549-202ENST00000376233 E2F8A0AVK6 867 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 A8MXQ7 604 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 LIASO43766 372 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 ESRRAP11474 423 aaPredicted RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 HADHBP55084 474 aaKnown RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PTK7Q13308 1070 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 SPDYCQ5MJ68 293 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 MON1BQ7L1V2 547 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PPIL6Q8IXY8 311 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 EXOC8Q8IYI6 725 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PDCD7Q8N8D1 485 aaKnown RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PPFIBP2Q8ND30 876 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 CYTH2Q99418 400 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 SMARCAD1Q9H4L7 1026 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 SMG5Q9UPR3 1016 aaKnown RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PTPRJQ12913 1337 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 A0A0B4J269 797 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 KRT37O76014 449 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 STAG3L1P0CL83 205 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 NQO1P15559 274 aaKnown RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 ARFIP2P53365 341 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 TGFB2P61812 414 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PLCB4Q15147 1175 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 GLIS1Q8NBF1 620 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 JOSD2Q8TAC2 188 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 TSNARE1Q96NA8 513 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 ACAP3Q96P50 834 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 FAM111AQ96PZ2 611 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PAFAH2Q99487 392 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 MTFR1LQ9H019 292 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 USH1CQ9Y6N9 552 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 VNN1O95497 513 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 PEX19P40855 299 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 GEMIN4P57678 1058 aaKnown RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 TREML2Q5T2D2 321 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 TXNRD3NBQ6F5E7 133 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 MOB2Q70IA6 237 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 APBB1IPQ7Z5R6 666 aaPredicted RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 ACOT1Q86TX2 421 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 DEPDC1BQ8WUY9 529 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 CENPTQ96BT3 561 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 ATXN7L3BQ96GX2 97 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 MAGEB18Q96M61 343 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 C12orf65Q9H3J6 166 aaKnown RBP11.11□□□□□ -0.63
ZNF549-202ENST00000376233 SMYD3Q9H7B4 428 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
ZNF549-202ENST00000376233 CREB3O43889 395 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 RPA3P35244 121 aaPredicted RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 ARL4AP40617 200 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 WNT7BP56706 349 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 SESN2P58004 480 aaPredicted RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 SARNPP82979 210 aaKnown RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 PTPN11Q06124 597 aaPredicted RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 NPNTQ6UXI9 565 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 GRAMD1AQ96CP6 724 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 VCPIP1Q96JH7 1222 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 NTPCRQ9BSD7 190 aaKnown RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 HERPUD2Q9BSE4 406 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 ZC3H7BQ9UGR2 993 aaKnown RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 USP18Q9UMW8 372 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 G3BP2Q9UN86 482 aaKnown RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 GYG2O15488 501 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 CIB2O75838 187 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 HAUS5O94927 633 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 CPA2P48052 419 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 VGLL4Q14135 290 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 MORF4L2Q15014 288 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 ZCCHC9Q8N567 271 aaKnown RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 DNAAF3Q8N9W5 541 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 RXFP2Q8WXD0 754 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 SENP1Q9P0U3 644 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 LOC102724159A0A0B4J2E5 919 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 A0A1W2PPM1 405 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 ADM5C9JUS6 153 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 MTA2O94776 668 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 DDNO94850 711 aaPredicted RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 NFICP08651 508 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 MMP8P22894 467 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 MIPP30301 263 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 MCL1Q07820 350 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 PWP2Q15269 919 aaKnown RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 C15orf59Q2T9L4 293 aaPredicted RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 TSNAXIP1Q2TAA8 658 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 CKAP2Q8WWK9 683 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 DDX1Q92499 740 aaKnown RBP11.1□□□□□ -0.63
ZNF549-202ENST00000376233 ATP2A3Q93084 1043 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 STAMBPL1Q96FJ0 436 aa11.1□□□□□ -0.63
ZNF549-202ENST00000376233 SYT11Q9BT88 431 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms